BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC15ZF11FM1.SCF screened BAC_end (966 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1639 1641 0.0 >3x_Contig1639 Length = 14140 Score = 1641 bits (828), Expect = 0.0 Identities = 873/883 (98%), Gaps = 4/883 (0%) Strand = Plus / Plus Query: 87 ccttgaaacttctcggtattaatttaataatgtaagcgtttctgttaatttcaccacttt 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4768 ccttgaaacttctcggtattaatttaataatgtaagcgtttctgttaatttcaccacttt 4827 Query: 147 tcttcactttagtaagcgctattgtcagtttttactaagatgaataatgcctaaaaaaaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4828 tcttcactttagtaagcgctattgtcagtttttactaagatgaataatgcctaaaaaaaa 4887 Query: 207 aaaaatcaaaaaaaaaaaaaccgctcgaaacgacagacaacacgaacactgtgtcttaat 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4888 aaaaatcaaaaaaaaaaaaaccgctcgaaacgacagacaacacgaacactgtgtcttaat 4947 Query: 267 gtttctgaggaaagtcaggtcggtggttagaagtaccccaaggtgcaagacaatctggga 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4948 gtttctgaggaaagtcaggtcggtggttagaagtaccccaaggtgcaagacaatctggga 5007 Query: 327 ttacggggttggataagccattgtaatagactgatctatagttactcctagtgtaaataa 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5008 ttacggggttggataagccattgtaatagactgatctatagttactcctagtgtaaataa 5067 Query: 387 ttgatgtgacactgacatatatatatgaggatggaaacaattatcaagtctgtcttgttt 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5068 ttgatgtgacactgacatatatatatgaggatggaaacaattatcaagtctgtcttgttt 5127 Query: 447 cacgctaactttattcaagtgtagtgtatggtcttttaatatattgattctacggaggtc 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5128 cacgctaactttattcaagtgtagtgtatggtcttttaatatattgattctacggaggtc 5187 Query: 507 aatccaatcaacctaaaactgtatctaatgtctgctgctgccactaaacaattcttgaaa 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5188 aatccaatcaacctaaaactgtatctaatgtctgctgctgccactaaacaattcttgaaa 5247 Query: 567 gctattgctgctcgtcgtactatctatgcgttgaagcctgaattgccatctggtgtatct 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5248 gctattgctgctcgtcgtactatctatgcgttgaagcctgaattgccatctggtgtatct 5307 Query: 627 atcaatgatgttcaggaagtggtccaggccattgtcaaggacaccccaacttctttcaac 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5308 atcaatgatgttcaggaagtggtccaggccattgtcaaggacaccccaacttctttcaac 5367 Query: 687 tgccaaggtaacagagcaattattctgactggtgaaacccacaagagtgtatgggattct 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5368 tgccaaggtaacagagcaattattctgactggtgaaacccacaagagtgtatgggattct 5427 Query: 747 gttgtgaatgccattgaaggtgataacgggtagaaaagacctgcttctgccagagatgaa 806 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 5428 gttgtgaatgccattgaaggtgataacggtaagaaaagacctgcttctgccagagatgaa 5487 Query: 807 gccttcggttctattatctttttgaccgatgacaagacttactg-aaagttgcaagctga 865 |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 5488 gccttcggttctattatctttttgaccgatgacaagac-tactgaaaagttgcaagctga 5546 Query: 866 ctttccagcatggtctgctatctt-ccatcttttgncgaacattccagtggtgctgctca 924 ||| |||||||||||||||||||| |||||||| | |||||||||||||||||||||||| Sbjct: 5547 cttcccagcatggtctgctatcttcccatctttcgccgaacattccagtggtgctgctca 5606 Query: 925 aatct-cacatggactgccatcgaattgttggttctgggtggt 966 ||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 5607 aatctccacatggactgccatcgaattgttgggtctgggtggt 5649 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 20,010 Number of Sequences: 1807 Number of extensions: 20010 Number of successful extensions: 1923 Number of sequences better than 1.0e-20: 1 length of query: 966 length of database: 10,358,551 effective HSP length: 16 effective length of query: 950 effective length of database: 10,329,639 effective search space: 9813157050 effective search space used: 9813157050 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)