BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC15ZF11RM1.SCF screened BAC_end (904 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1750 1598 0.0 >3x_Contig1750 Length = 14427 Score = 1598 bits (806), Expect = 0.0 Identities = 843/850 (99%), Gaps = 4/850 (0%) Strand = Plus / Plus Query: 58 tatcttgaatgctttcttgatgggatctgccggtaatcagacaatcaattcgtggagaca 117 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11143 tatcttgaatgctttcttgatgggatctgccggtaatcagacaatcaattcgtggagaca 11202 Query: 118 ggaagacgatagatcctctgaactgttccaaaacccatcttattggaccgacttggcaaa 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11203 ggaagacgatagatcctctgaactgttccaaaacccatcttattggaccgacttggcaaa 11262 Query: 178 actattggaaaaggggaagttcaatgcagttttttttgcagatgttctaggtccgtacga 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11263 actattggaaaaggggaagttcaatgcagttttttttgcagatgttctaggtccgtacga 11322 Query: 238 tgtctacaaaggtcccggtaactttggtccagttgctaaggctggatctcaatggccgat 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11323 tgtctacaaaggtcccggtaactttggtccagttgctaaggctggatctcaatggccgat 11382 Query: 298 ctcagatccaagttacttcattccgttgatggcttcggttaccaagaatttggcttttgg 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11383 ctcagatccaagttacttcattccgttgatggcttcggttaccaagaatttggcttttgg 11442 Query: 358 tatgacgatctcgaccatcagtgaacaaccataccatcttgctcggcgattagggactct 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11443 tatgacgatctcgaccatcagtgaacaaccataccatcttgctcggcgattagggactct 11502 Query: 418 ggaccttttgagtaatggtagagttggttggaatatagtgacttcttacttggacagtgc 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11503 ggaccttttgagtaatggtagagttggttggaatatagtgacttcttacttggacagtgc 11562 Query: 478 ctcaagaaacttattaggtggcgagacccttcctgaaaacgacgaaagatatgagagagc 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11563 ctcaagaaacttattaggtggcgagacccttcctgaaaacgacgaaagatatgagagagc 11622 Query: 538 tgaagaatatgttgacgtagtatacaagttgtttttaagttcatggaaggatggcgctgt 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11623 tgaagaatatgttgacgtagtatacaagttgtttttaagttcatggaaggatggcgctgt 11682 Query: 598 aaaaaagaataaaaagacaggcatttttaccgatccagaaggtttgagacatatcaacca 657 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11683 aaaaaagaataaaaagacaggcatttttaccgatccagaaggtttgagacatatcaacca 11742 Query: 658 cgaaggcaagtatttcaaagtgccaggtccttcaataacttctccaagtcaacagaagtt 717 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11743 cgaaggcaagtatttcaaagtgccaggtccttcaataacttctccaagtcaacagaagtt 11802 Query: 718 gcccgttattatccaagcaggtgcatcttctaaaggtagggatcttgccgcaagaactgc 777 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 11803 gcccgttattatccaagcaggtgcatctcctaaaggtagggatcttgccgcaagaactgc 11862 Query: 778 tgagattattttcttgtccaacaagaccaaagagtcgttacgtgaattcattcatgctgt 837 |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| Sbjct: 11863 tgagattattttcttgtccaacaagaccaaggagtcgttacgtgaatccattcatgctgt 11922 Query: 838 caaggccatcgcgagtg-aaagttcaagagaga-ttatccaaaatc-agtttttggcatt 894 ||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 11923 caaggccatcgcgagtgaaaagttcaagagagacttatccaaaatcaagtttttggcatt 11982 Query: 895 -attactgtc 903 ||||||||| Sbjct: 11983 aattactgtc 11992 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6226 Number of Sequences: 1807 Number of extensions: 6226 Number of successful extensions: 41 Number of sequences better than 1.0e-20: 1 length of query: 904 length of database: 10,358,551 effective HSP length: 16 effective length of query: 888 effective length of database: 10,329,639 effective search space: 9172719432 effective search space used: 9172719432 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)