BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC15ZF12FM1.SCF screened BAC_end (962 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1512 1100 0.0 >3x_Contig1512 Length = 8803 Score = 1100 bits (555), Expect = 0.0 Identities = 573/579 (98%) Strand = Plus / Minus Query: 88 tacaaacaaagaaaattcgatgaagctattgaaaaatacaatgaagcttgggaaactcat 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 579 tacaaacaaagaaaattcgatgaagctattgaaaaatacaatgaagcttgggaaactcat 520 Query: 148 aatgacatcacgtatctaaacaaccgtgctgcagcagaatatgaaaaaggtgattacgag 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 aatgacatcacgtatctaaacaaccgtgctgcagcagaatatgaaaaaggtgattacgag 460 Query: 208 gcagccatcgaatttttttcaaaggctgtggaacaaggtagagaactcagagctgattac 267 |||||||||||| | | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 gcagccatcgaaactctaacaaaggctgtggaacaaggtagagaactcagagctgattac 400 Query: 268 aaagtcatttcaaaatctttcgctcgtatgggtaactcttaccacaagcttggcgattta 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 aaagtcatttcaaaatctttcgctcgtatgggtaactcttaccacaagcttggcgattta 340 Query: 328 aagaaggctatcgactactatgaaaaatctctaactgaacatcgtaccccagatatctta 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 aagaaggctatcgactactatgaaaaatctctaactgaacatcgtaccccagatatctta 280 Query: 388 acgaaattaagaaacacagaaaaggaactcaagcaaaaggaagcagaatcttacatggac 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 acgaaattaagaaacacagaaaaggaactcaagcaaaaggaagcagaatcttacatggac 220 Query: 448 cctgaaaaggcagaagaagctagattacaaggtaaggaatacttcactaaggctgactgg 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 219 cctgaaaaggcagaagaagctagattacaaggtaaggaatacttcactaaggctgactgg 160 Query: 508 ccaaaggctgtcgaagcatacactgaaatgatcaaaagaaatccaaacgatgccagaggt 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 159 ccaaaggctgtcgaagcatacactgaaatgatcaaaagaaatccaaacgatgccagaggt 100 Query: 568 tactctaacagagctgcagctctatctaagttgatgtcattcgctgacgccattagagac 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99 tactctaacagagctgcagctctatctaagttgatgtcattcgctgacgccattagagac 40 Query: 628 tgtgacaaagccatcgagaaggatccaaactttgtcaga 666 |||||||||||||||||||| |||||||||||||||||| Sbjct: 39 tgtgacaaagccatcgagaaagatccaaactttgtcaga 1 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6351 Number of Sequences: 1807 Number of extensions: 6351 Number of successful extensions: 31 Number of sequences better than 1.0e-20: 1 length of query: 962 length of database: 10,358,551 effective HSP length: 16 effective length of query: 946 effective length of database: 10,329,639 effective search space: 9771838494 effective search space used: 9771838494 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)