BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC15ZF12RM1.SCF screened BAC_end (947 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1801 1540 0.0 >3x_Contig1801 Length = 57606 Score = 1540 bits (777), Expect = 0.0 Identities = 857/881 (97%), Gaps = 2/881 (0%) Strand = Plus / Plus Query: 44 cttgcacaggtgggatcttgggttttggtgaaactgaagatgat-acatcgggttcgttc 102 ||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||| Sbjct: 14052 cttgcacaggtgggatcttgggtcttggtgaaactgaagatgatcacattgggttcgttc 14111 Query: 103 acactttggcaaatatgagtccacatccagaatctttacctattaatagattagtttcca 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14112 acactttggcaaatatgagtccacatccagaatctttacctattaatagattagtttcca 14171 Query: 163 ttaaaggtacaccaatgcatgaggaacttaagaaggtcagcagtaagaaatttttttttt 222 |||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 14172 ttaaaggtacaccaatgcatgaggaacttaagaaggtcagcagtaagaaattggaattcg 14231 Query: 223 atgagatcttaagaaccgtggcactagccagaattgtattgccacaagcgattatcagat 282 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 14232 atgagatcttaagaaccgtggcactagccagaattgtaatgccacaagcgattatcagat 14291 Query: 283 tagctgcaggtcgttacacgatgaaggaaactgaacaattcttatgcttcatggcaggtt 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14292 tagctgcaggtcgttacacgatgaaggaaactgaacaattcttatgcttcatggcaggtt 14351 Query: 343 gtaatgccatctttgtcggtaaaaagatgttaacaactatgtgtacaggctgggatgaag 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14352 gtaatgccatctttgtcggtaaaaagatgttaacaactatgtgtacaggctgggatgaag 14411 Query: 403 acaaagcaatgctttcgaaatggggtctacaaccaatggaatcgttttcatattccgcta 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14412 acaaagcaatgctttcgaaatggggtctacaaccaatggaatcgttttcatattccgcta 14471 Query: 463 ataaggctccagctgaggcagcgtgtgccgggggccaataaagaatggccatcttttaga 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14472 ataaggctccagctgaggcagcgtgtgccgggggccaataaagaatggccatcttttaga 14531 Query: 523 aacactttctgtgtgtaatagtctttaatttctgtttattagttttctccatatactggg 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14532 aacactttctgtgtgtaatagtctttaatttctgtttattagttttctccatatactggg 14591 Query: 583 ggaatcattatttatccatattagtttaccaaatttataagctgcatattaagatgttag 642 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14592 ggaatcattatttatccatattagtttaccaaatttataagctgcatattaagatgttag 14651 Query: 643 ttatgacaaagggtaaatcggtcagtgagagagttagagaaaaagatggattagttatta 702 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14652 ttatgacaaagggtaaatcggtcagtgagagagttagagaaaaagatggattagttatta 14711 Query: 703 gttgtagttgtagttgtttgggaaaaagagcgcctcatacggttcaaaattcaagcagtg 762 |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| Sbjct: 14712 gttgtagttgtagttgtttgtgaaaaagagcgcctcagacggttcaaaattcaagcagtg 14771 Query: 763 gcagttttcttctcttgttctggggctgtggtttcggctggttcttcaccaccacattta 822 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 14772 gcagtttccttctcttgttctggggctgtggtttcggctggttcttcaccaccacattga 14831 Query: 823 gtgagcaaat-agtaacataagcgtttggttcgaaattttcaagcttaaatgatttcaaa 881 |||||||||| || |||||||||||||||||||| ||||||||||||| |||| |||||| Sbjct: 14832 gtgagcaaataagaaacataagcgtttggttcgatattttcaagcttagatgagttcaaa 14891 Query: 882 gtatcttcgccaccgtatttttttgaaagacttttcaagta 922 ||| ||||||||||||||| ||||| |||| ||||||||| Sbjct: 14892 gtagcttcgccaccgtattcttttggaagaactttcaagta 14932 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8770 Number of Sequences: 1807 Number of extensions: 8770 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 947 length of database: 10,358,551 effective HSP length: 16 effective length of query: 931 effective length of database: 10,329,639 effective search space: 9616893909 effective search space used: 9616893909 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)