BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC15ZG01FM1.SCF screened BAC_end
         (956 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1488                                                        1511   0.0  

>3x_Contig1488 
          Length = 9807

 Score = 1511 bits (762), Expect = 0.0
 Identities = 786/794 (98%)
 Strand = Plus / Plus

                                                                        
Query: 85   ttgaaagagaggtgagaactagttacacatcgtttcaccttctcaccgatcttcaaaaag 144
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5197 ttgaaagagaggtgagaactagttacacatcgtttcaccttctcaccgatcttcaaaaag 5256

                                                                        
Query: 145  acaacaatttcatctatgcttgagttatcaccttttggttctggtgctcctgtcatggga 204
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5257 acaacaatttcatctatgcttgagttatcaccttttggttctggtgctcctgtcatggga 5316

                                                                        
Query: 205  tgataatctacggttgaagcagaagagattcgagaaggctgtctttccattttaatgctt 264
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5317 tgataatctacggatgaagcagaagagattcgagaaggctgtctttccattttaatgctt 5376

                                                                        
Query: 265  tctgtatcagaaacattggccgctgctgccgctgcagcagcggctggaactgctaaattt 324
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5377 tctgtatcagaaacattggccgctgctgccgctgcagcagcggctggaactgctaaattt 5436

                                                                        
Query: 325  ttagacgttggggaattcgatggatctgaagctgtttggttggctaatttcgccatatga 384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5437 ttagacgttggggaattcgatggatctgaagctgtttggttggctaatttcgccatatga 5496

                                                                        
Query: 385  tacgctgaaaacctcttcgaggctcttctttgcagattatttccctttttcaattgagtt 444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5497 tacgctgaaaacctcttcgaggctcttctttgcagattatttccctttttcaattgagtt 5556

                                                                        
Query: 445  aacgcatcgctttcagaacccttgggaacttctaacgtaggtatctgttttgtttcaata 504
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5557 aacgcatcgctttcagaacccttgggaacttctaacgtaggtatctgttttgtttcaata 5616

                                                                        
Query: 505  tgagctgaagtagatgtcggtcccgcgccagccaaagatgtcgttgcgctgactacggat 564
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5617 tgagctgaagtagatgtcggtcccgcgccagccaaagatgtcgttgcgctgactacggat 5676

                                                                        
Query: 565  gaaacggaagatctttgaggagtatgctgatatttcaaagcatcttcattcctgctcagt 624
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5677 gaaacggaagatctttgaggagtatgctgatatttcaaagcatcttcattcctgctcagt 5736

                                                                        
Query: 625  tttatcatcgcctgtttaaccttaagtttctccaagagtttaactataatatctctgatc 684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5737 tttatcatcgcctgtttaaccttaagtttctccaagagtttaactataatatctctgatc 5796

                                                                        
Query: 685  tgcggtaggtatttattcaacgttttctcagatgcagtctctctcaatgccaccttcaat 744
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 5797 tgcggtaggtatttattcaacgtttcctcagatgcagtctctctcaatgccacctccaat 5856

                                                                        
Query: 745  attcttcgaaggtcttttggcacatcgccaagatccgaaatttcaattctagcatgggta 804
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 5857 attcttcgaaggtcttttggcacatcgccaagatccgaaatatcaattctagcatgggta 5916

                                                                        
Query: 805  aaatgtctactgactaactttgaatctttacccaattgaacatacacatcggaaacatta 864
            ||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||
Sbjct: 5917 aaatgtctactgactaacttgaaatcattacccaattgaacatacacatcggaaacatta 5976

                          
Query: 865  cgctcggttacttt 878
            |||||||| |||||
Sbjct: 5977 cgctcggtaacttt 5990


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7101
Number of Sequences: 1807
Number of extensions: 7101
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 956
length of database: 10,358,551
effective HSP length: 16
effective length of query: 940
effective length of database: 10,329,639
effective search space: 9709860660
effective search space used: 9709860660
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)