BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC15ZG01FM1.SCF screened BAC_end (956 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1488 1511 0.0 >3x_Contig1488 Length = 9807 Score = 1511 bits (762), Expect = 0.0 Identities = 786/794 (98%) Strand = Plus / Plus Query: 85 ttgaaagagaggtgagaactagttacacatcgtttcaccttctcaccgatcttcaaaaag 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5197 ttgaaagagaggtgagaactagttacacatcgtttcaccttctcaccgatcttcaaaaag 5256 Query: 145 acaacaatttcatctatgcttgagttatcaccttttggttctggtgctcctgtcatggga 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5257 acaacaatttcatctatgcttgagttatcaccttttggttctggtgctcctgtcatggga 5316 Query: 205 tgataatctacggttgaagcagaagagattcgagaaggctgtctttccattttaatgctt 264 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5317 tgataatctacggatgaagcagaagagattcgagaaggctgtctttccattttaatgctt 5376 Query: 265 tctgtatcagaaacattggccgctgctgccgctgcagcagcggctggaactgctaaattt 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5377 tctgtatcagaaacattggccgctgctgccgctgcagcagcggctggaactgctaaattt 5436 Query: 325 ttagacgttggggaattcgatggatctgaagctgtttggttggctaatttcgccatatga 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5437 ttagacgttggggaattcgatggatctgaagctgtttggttggctaatttcgccatatga 5496 Query: 385 tacgctgaaaacctcttcgaggctcttctttgcagattatttccctttttcaattgagtt 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5497 tacgctgaaaacctcttcgaggctcttctttgcagattatttccctttttcaattgagtt 5556 Query: 445 aacgcatcgctttcagaacccttgggaacttctaacgtaggtatctgttttgtttcaata 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5557 aacgcatcgctttcagaacccttgggaacttctaacgtaggtatctgttttgtttcaata 5616 Query: 505 tgagctgaagtagatgtcggtcccgcgccagccaaagatgtcgttgcgctgactacggat 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5617 tgagctgaagtagatgtcggtcccgcgccagccaaagatgtcgttgcgctgactacggat 5676 Query: 565 gaaacggaagatctttgaggagtatgctgatatttcaaagcatcttcattcctgctcagt 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5677 gaaacggaagatctttgaggagtatgctgatatttcaaagcatcttcattcctgctcagt 5736 Query: 625 tttatcatcgcctgtttaaccttaagtttctccaagagtttaactataatatctctgatc 684 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5737 tttatcatcgcctgtttaaccttaagtttctccaagagtttaactataatatctctgatc 5796 Query: 685 tgcggtaggtatttattcaacgttttctcagatgcagtctctctcaatgccaccttcaat 744 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 5797 tgcggtaggtatttattcaacgtttcctcagatgcagtctctctcaatgccacctccaat 5856 Query: 745 attcttcgaaggtcttttggcacatcgccaagatccgaaatttcaattctagcatgggta 804 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 5857 attcttcgaaggtcttttggcacatcgccaagatccgaaatatcaattctagcatgggta 5916 Query: 805 aaatgtctactgactaactttgaatctttacccaattgaacatacacatcggaaacatta 864 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 5917 aaatgtctactgactaacttgaaatcattacccaattgaacatacacatcggaaacatta 5976 Query: 865 cgctcggttacttt 878 |||||||| ||||| Sbjct: 5977 cgctcggtaacttt 5990 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7101 Number of Sequences: 1807 Number of extensions: 7101 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 956 length of database: 10,358,551 effective HSP length: 16 effective length of query: 940 effective length of database: 10,329,639 effective search space: 9709860660 effective search space used: 9709860660 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)