BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC15ZH01RM1.SCF screened BAC_end (905 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig394 644 0.0 3x_Contig938 349 6e-96 >3x_Contig394 Length = 1378 Score = 644 bits (325), Expect = 0.0 Identities = 325/325 (100%) Strand = Plus / Plus Query: 45 ttcagcgaaaatatcgatcttattcaaaaatagaaccaccgaacttcttgcaaaccatct 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1054 ttcagcgaaaatatcgatcttattcaaaaatagaaccaccgaacttcttgcaaaccatct 1113 Query: 105 actgtttaccactgagtcaaaaagaatcaaagattcctccaatctattttgtgaattgtc 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1114 actgtttaccactgagtcaaaaagaatcaaagattcctccaatctattttgtgaattgtc 1173 Query: 165 ttccagaagtgtttgatcgtattcggataaagagacacaaaagatgatcaatgtcacgtt 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1174 ttccagaagtgtttgatcgtattcggataaagagacacaaaagatgatcaatgtcacgtt 1233 Query: 225 atcaaagcaatgaatccatttcttacgttctgaccgctgtccaccgacatcgaagaagtg 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1234 atcaaagcaatgaatccatttcttacgttctgaccgctgtccaccgacatcgaagaagtg 1293 Query: 285 tagtttcaagttcttatccaaatctatcatagtgtcgaaaatacctgaagtctttttcct 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1294 tagtttcaagttcttatccaaatctatcatagtgtcgaaaatacctgaagtctttttcct 1353 Query: 345 tgttctgataacatcagtgatggtg 369 ||||||||||||||||||||||||| Sbjct: 1354 tgttctgataacatcagtgatggtg 1378 >3x_Contig938 Length = 2936 Score = 349 bits (176), Expect = 6e-96 Identities = 199/206 (96%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 682 tgtattccagtagcttctctctgctgaaaccgttttgatgtaatattttcaactgctgca 741 |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tgtattcc-gtagctcctctctgctgaaaccgttttgatgtaatattttcaactgctgca 59 Query: 742 aaacggtagatttcccactttcacctgaacccaataataatacttttaatgcatttactg 801 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 aaacggtagatttcccactttcacctgaacccaataataatacttttaatgcatttactg 119 Query: 802 tctcagatccaccagnagattgaccccctngaacattcactgtgccattccgttttgcca 861 ||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 120 tctcagatccaccaggagattgaccccctgaagcattcactgtgccattccgttttgcca 179 Query: 862 gatcagtatcgaaaccttttactcca 887 |||||||||||||||| ||||||||| Sbjct: 180 gatcagtatcgaaaccatttactcca 205 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7646 Number of Sequences: 1807 Number of extensions: 7646 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 2 length of query: 905 length of database: 10,358,551 effective HSP length: 16 effective length of query: 889 effective length of database: 10,329,639 effective search space: 9183049071 effective search space used: 9183049071 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)