BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC15ZH02FM1.SCF screened BAC_end (966 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1648 1657 0.0 >3x_Contig1648 Length = 16375 Score = 1657 bits (836), Expect = 0.0 Identities = 872/881 (98%), Gaps = 3/881 (0%) Strand = Plus / Plus Query: 87 aatgcagaagaaaagaaaaatgtgatagataagttacgccaggaattggatgagttgtac 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5348 aatgcagaagaaaagaaaaatgtgatagataagttacgccaggaattggatgagttgtac 5407 Query: 147 aaattagagacttttaagattcacagcgccaaacaagaaacaaacaatataacgttccac 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5408 aaattagagacttttaagattcacagcgccaaacaagaaacaaacaatataacgttccac 5467 Query: 207 cattcagatacatggctctccatgaggtattaccaactacagatcatgatttatagacca 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5468 cattcagatacatggctctccatgaggtattaccaactacagatcatgatttatagacca 5527 Query: 267 agtgctttgataccaaaacccgcgatggattctctaactattctgggggatgcatgtctc 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5528 agtgctttgataccaaaacccgcgatggattctctaactattctgggggatgcatgtctc 5587 Query: 327 aaatccttgaaatacacctataacttataccagaaaaagttattaccgttaaattggatc 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5588 aaatccttgaaatacacctataacttataccagaaaaagttattaccgttaaattggatc 5647 Query: 387 actttgttccgtgtactcactatatgcaacactatgctctattgcttatgccaatggtcc 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5648 actttgttccgtgtactcactatatgcaacactatgctctattgcttatgccaatggtcc 5707 Query: 447 atcgatatcattgaatccaagatcgaaatacaccaatgtattgaagtgcttcgacacttt 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5708 atcgatatcattgaatccaagatcgaaatacaccaatgtattgaagtgcttcgacacttt 5767 Query: 507 ggtgccaaatgggtatttgcagccaaatgcgctgaaattttttcaagcatcatcaatacg 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5768 ggtgccaaatgggtatttgcagccaaatgcgctgaaattttttcaagcatcatcaatacg 5827 Query: 567 atcttggatatcagtttgtccaacggtagagtacccaacatggataaattgaccagagaa 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5828 atcttggatatcagtttgtccaacggtagagtacccaacatggataaattgaccagagaa 5887 Query: 627 ctatttggcgccagtaacgaataccaagagatcttggatgagaataatgtcgatatttct 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5888 ctatttggcgccagtaacgaataccaagagatcttggatgagaataatgtcgatatttct 5947 Query: 687 tgggtggatagtatcgtctgaggggtggtacggtggtatataaagatataataaaaaagt 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5948 tgggtggatagtatcgtctgaggggtggtacggtggtatataaagatataataaaaaagt 6007 Query: 747 gtgtatctgattaatgaatgtattgatgtaagtttgccattgtggtggtaaaagcagaga 806 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6008 gtgtatctgattaatgaatgtattgatgtaagtttgccattgtggtggtaaaagcagaga 6067 Query: 807 aagcagcaaagagcagtatatggttagtgagcatgtgtggtctaatgatgccatgatata 866 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6068 aagcagcaaagagcagtatatggttagtgagcatgtgtggtctaatgatgccatgatata 6127 Query: 867 tggagcacttacatttttaaccgncctgt-aagatgcctncttancttantgttagagcg 925 ||||||||||||| ||||||||| ||||| ||||||||| |||| |||| || ||||||| Sbjct: 6128 tggagcacttaca-ttttaaccg-cctgtaaagatgcctccttagcttagtggtagagcg 6185 Query: 926 ttgcacttgtaatgcaaaggtcgctagttcattcctggcag 966 ||||||||||||||||||||||||||||||| | ||||||| Sbjct: 6186 ttgcacttgtaatgcaaaggtcgctagttcaattctggcag 6226 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6630 Number of Sequences: 1807 Number of extensions: 6630 Number of successful extensions: 45 Number of sequences better than 1.0e-20: 1 length of query: 966 length of database: 10,358,551 effective HSP length: 16 effective length of query: 950 effective length of database: 10,329,639 effective search space: 9813157050 effective search space used: 9813157050 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)