BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC15ZH02FM1.SCF screened BAC_end
         (966 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1648                                                        1657   0.0  

>3x_Contig1648 
          Length = 16375

 Score = 1657 bits (836), Expect = 0.0
 Identities = 872/881 (98%), Gaps = 3/881 (0%)
 Strand = Plus / Plus

                                                                        
Query: 87   aatgcagaagaaaagaaaaatgtgatagataagttacgccaggaattggatgagttgtac 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5348 aatgcagaagaaaagaaaaatgtgatagataagttacgccaggaattggatgagttgtac 5407

                                                                        
Query: 147  aaattagagacttttaagattcacagcgccaaacaagaaacaaacaatataacgttccac 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5408 aaattagagacttttaagattcacagcgccaaacaagaaacaaacaatataacgttccac 5467

                                                                        
Query: 207  cattcagatacatggctctccatgaggtattaccaactacagatcatgatttatagacca 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5468 cattcagatacatggctctccatgaggtattaccaactacagatcatgatttatagacca 5527

                                                                        
Query: 267  agtgctttgataccaaaacccgcgatggattctctaactattctgggggatgcatgtctc 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5528 agtgctttgataccaaaacccgcgatggattctctaactattctgggggatgcatgtctc 5587

                                                                        
Query: 327  aaatccttgaaatacacctataacttataccagaaaaagttattaccgttaaattggatc 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5588 aaatccttgaaatacacctataacttataccagaaaaagttattaccgttaaattggatc 5647

                                                                        
Query: 387  actttgttccgtgtactcactatatgcaacactatgctctattgcttatgccaatggtcc 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5648 actttgttccgtgtactcactatatgcaacactatgctctattgcttatgccaatggtcc 5707

                                                                        
Query: 447  atcgatatcattgaatccaagatcgaaatacaccaatgtattgaagtgcttcgacacttt 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5708 atcgatatcattgaatccaagatcgaaatacaccaatgtattgaagtgcttcgacacttt 5767

                                                                        
Query: 507  ggtgccaaatgggtatttgcagccaaatgcgctgaaattttttcaagcatcatcaatacg 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5768 ggtgccaaatgggtatttgcagccaaatgcgctgaaattttttcaagcatcatcaatacg 5827

                                                                        
Query: 567  atcttggatatcagtttgtccaacggtagagtacccaacatggataaattgaccagagaa 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5828 atcttggatatcagtttgtccaacggtagagtacccaacatggataaattgaccagagaa 5887

                                                                        
Query: 627  ctatttggcgccagtaacgaataccaagagatcttggatgagaataatgtcgatatttct 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5888 ctatttggcgccagtaacgaataccaagagatcttggatgagaataatgtcgatatttct 5947

                                                                        
Query: 687  tgggtggatagtatcgtctgaggggtggtacggtggtatataaagatataataaaaaagt 746
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5948 tgggtggatagtatcgtctgaggggtggtacggtggtatataaagatataataaaaaagt 6007

                                                                        
Query: 747  gtgtatctgattaatgaatgtattgatgtaagtttgccattgtggtggtaaaagcagaga 806
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6008 gtgtatctgattaatgaatgtattgatgtaagtttgccattgtggtggtaaaagcagaga 6067

                                                                        
Query: 807  aagcagcaaagagcagtatatggttagtgagcatgtgtggtctaatgatgccatgatata 866
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6068 aagcagcaaagagcagtatatggttagtgagcatgtgtggtctaatgatgccatgatata 6127

                                                                        
Query: 867  tggagcacttacatttttaaccgncctgt-aagatgcctncttancttantgttagagcg 925
            ||||||||||||| ||||||||| ||||| ||||||||| |||| |||| || |||||||
Sbjct: 6128 tggagcacttaca-ttttaaccg-cctgtaaagatgcctccttagcttagtggtagagcg 6185

                                                     
Query: 926  ttgcacttgtaatgcaaaggtcgctagttcattcctggcag 966
            ||||||||||||||||||||||||||||||| | |||||||
Sbjct: 6186 ttgcacttgtaatgcaaaggtcgctagttcaattctggcag 6226


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6630
Number of Sequences: 1807
Number of extensions: 6630
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 966
length of database: 10,358,551
effective HSP length: 16
effective length of query: 950
effective length of database: 10,329,639
effective search space: 9813157050
effective search space used: 9813157050
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)