BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC15ZH06FM1.SCF screened BAC_end (960 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1709 1554 0.0 >3x_Contig1709 Length = 16948 Score = 1554 bits (784), Expect = 0.0 Identities = 851/872 (97%), Gaps = 4/872 (0%) Strand = Plus / Minus Query: 87 cagcagccaagaatttccagttggactcagggtcattaggatcgacaaagcctgttggat 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8820 cagcagccaagaatttccagttggactcagggtcattaggatcgacaaagcctgttggat 8761 Query: 147 gaacctgaatttggtccatatcaattaatttagcacctagcctttctagtaaaacctgcc 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8760 gaacctgaatttggtccatatcaattaatttagcacctagcctttctagtaaaacctgcc 8701 Query: 207 cttcacccaaagtctgatcaccgtttgtggttggtaaatcgactagatgtggggcatatt 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8700 cttcacccaaagtctgatcaccgtttgtggttggtaaatcgactagatgtggggcatatt 8641 Query: 267 tttccaacaacttcttgttgaaaccaaatccacctgtacagaacacgacattgtttgttt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8640 tttccaacaacttcttgttgaaaccaaatccacctgtacagaacacgacattgtttgttt 8581 Query: 327 caatggaatgtgttccttctgaatcctcgtagactacaccatttaccttattattctcat 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8580 caatggaatgtgttccttctgaatcctcgtagactacaccatttaccttattattctcat 8521 Query: 387 caagtttgacatcaattaccttgctattcaattggatcttgacgagatctgcgccatacg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8520 caagtttgacatcaattaccttgctattcaattggatcttgacgagatctgcgccatacg 8461 Query: 447 attgtaacgattttttcaaagtgtctacaatctggaaaccgggtggcagtttcccgctag 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8460 attgtaacgattttttcaaagtgtctacaatctggaaaccgggtggcagtttcccgctag 8401 Query: 507 atctatgggttcttgaaaccgaatgaccacccaattgggcaagtttatccaacggaatct 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8400 atctatgggttcttgaaaccgaatgaccacccaattgggcaagtttatccaacggaatct 8341 Query: 567 gatgctcagtttgtagccaagaaatagcattcgctgaatctttggccaacttctccatca 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8340 gatgctcagtttgtagccaagaaatagcattcgctgaatctttggccaacttctccatca 8281 Query: 627 atgtcacaatacctttccctctagcagatttgatcgtatcatctgcaaataactccggat 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8280 atgtcacaatacctttccctctagcagatttgatcgtatcatctgcaaataactccggat 8221 Query: 687 tatcaattatcttaagtttttcttgagtgtcggtaccagcaccattaataccgcttgacg 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8220 tatcaattatcttaagtttttcttgagtgtcggtaccagcaccattaataccgcttgacg 8161 Query: 747 ccttgatcgaattaccaccaatgcttcctgtcttntccaatanaactattggaatattaa 806 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 8160 ccttgatcgaattaccaccaatgcttcctgtcttttccaataaaactattggaatattaa 8101 Query: 807 acttcactagttgggtagaagtcgntaatccagctaatcctgatcctataactacaacgg 866 ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| | Sbjct: 8100 acttcactagttgggtagaggtcgttaatccagctaatcctgatcctataactacaac-g 8042 Query: 867 ggtttanacatgggnntgcttgattttttgaaaacaacgagtngncccaatttaccacaa 926 |||||| |||||| ||||||||| |||||||||||||||| | || ||| ||| |||| Sbjct: 8041 ggtttagacatgg--ttgcttgattctttgaaaacaacgagtagaccaaatatacaacaa 7984 Query: 927 c-caaagttaaagttttttaagttattgttgt 957 | ||||| ||||| ||||||| ||| ||||| Sbjct: 7983 caaaaagtaaaagtattttaaggtatcgttgt 7952 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6348 Number of Sequences: 1807 Number of extensions: 6348 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 960 length of database: 10,358,551 effective HSP length: 16 effective length of query: 944 effective length of database: 10,329,639 effective search space: 9751179216 effective search space used: 9751179216 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)