BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC15ZH08FM1.SCF screened BAC_end (948 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1159 1586 0.0 >3x_Contig1159 Length = 4873 Score = 1586 bits (800), Expect = 0.0 Identities = 848/858 (98%), Gaps = 5/858 (0%) Strand = Plus / Minus Query: 86 tatctttgatgaactctacttcacctcgtgtgaaatgtcaagctactttggccttgagaa 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1470 tatctttgatgaactctacttcacctcgtgtgaaatgtcaagctactttggccttgagaa 1411 Query: 146 acttagcttcagataccaactaccaattggagattgttagagctggtggattaccagact 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1410 acttagcttcagataccaactaccaattggagattgttagagctggtggattaccagact 1351 Query: 206 tggttcaattgattcagtcggattctttaccattagtcttggccagcgtcgcatgtatca 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1350 tggttcaattgattcagtcggattctttaccattagtcttggccagcgtcgcatgtatca 1291 Query: 266 gaaatatttccatccatccattaaacgaaggtctaattgtagatgccggatttctaccac 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1290 gaaatatttccatccatccattaaacgaaggtctaattgtagatgccggatttctaccac 1231 Query: 326 ctttagtaaaattgcttgattaccaagaatcagaagaaattcaatgtcatgctgtttcaa 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1230 ctttagtaaaattgcttgattaccaagaatcagaagaaattcaatgtcatgctgtttcaa 1171 Query: 386 ctttaagaaacttggctgcttcatctgaaaaaaatagagcagagttcttccaatctggtg 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1170 ctttaagaaacttggctgcttcatctgaaaaaaatagagcagagttcttccaatctggtg 1111 Query: 446 taattgaaaaattcaagcaacttgccttgacatgtcccatcagcgttcaaagtgaaatta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1110 taattgaaaaattcaagcaacttgccttgacatgtcccatcagcgttcaaagtgaaatta 1051 Query: 506 gtgcttgctttgctatcttggcactttcagataatactaaatatgatcttttgcaacaag 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1050 gtgcttgctttgctatcttggcactttcagataatactaaatatgatcttttgcaacaag 991 Query: 566 acgtactaaaagttttgatcccaatgacaatgtcccaggaccaagagatctctggtaact 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 990 acgtactaaaagttttgatcccaatgacaatgtcccaggaccaagagatctctggtaact 931 Query: 626 ctgctgctgctgtagcaaacttgatctctagggtcagcaatttagagaaaatattggagt 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 930 ctgctgctgctgtagcaaacttgatctctagggtcagcaatttagagaaaatattggagt 871 Query: 686 actgnggtcaaccaaacgatggtatcaagggtttcttgatcagattcttgtctagtgact 745 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 870 actggggtcaaccaaacgatggtatcaagggtttcttgatcagattcttgtctagtgact 811 Query: 746 tccctacctatgaacatattgctctatggaccatttttacactatttgaatgtcacaacg 805 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 810 tccctacctatgaacatattgctctatggaccattttacaactatttgaatgtcacaacg 751 Query: 806 aaaccatttac-agttaattaaagaagatcanaaactcgtcaacggggtcaagaaaatcg 864 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 750 aaaccatttacaagttaattaaagaagatcaaaaactcgtcaacggggtcaagaaaatcg 691 Query: 865 ctgatg-aaactacgctgtggctagggaatacatgc-agatggacaagata-caacattg 921 |||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 690 ctgatgaaaactacgctgtggctagggaatacatgcaagatggacaagataccaacattg 631 Query: 922 atcac-atggaaattcga 938 ||||| |||||||||||| Sbjct: 630 atcacaatggaaattcga 613 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7334 Number of Sequences: 1807 Number of extensions: 7334 Number of successful extensions: 64 Number of sequences better than 1.0e-20: 1 length of query: 948 length of database: 10,358,551 effective HSP length: 16 effective length of query: 932 effective length of database: 10,329,639 effective search space: 9627223548 effective search space used: 9627223548 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)