BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC16ZA05FM1.SCF screened BAC_end (956 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1693 1570 0.0 >3x_Contig1693 Length = 15531 Score = 1570 bits (792), Expect = 0.0 Identities = 857/875 (97%), Gaps = 3/875 (0%) Strand = Plus / Plus Query: 84 ttatatgggatcctaatggaatccatctcagggacagtatgaaggaaatcaaatgcaatg 143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78 ttatatgggatcctaatggaatccatctcagggacagtatgaaggaaatcaaatgcaatg 137 Query: 144 aagtggatttcacagttttcaagtccttgacctcagatgatttgtctaccttcaattatc 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 aagtggatttcacagttttcaagtccttgacctcagatgatttgtctaccttcaattatc 197 Query: 204 aatacgaatctttttttttttggtccaaacttataattgatggattattcatgcttttca 263 |||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 198 aatacgaatcttccataatttggtccaaacttataattgatggattattcatgcttttca 257 Query: 264 cgggaaatttatacaaaccatggtatcatcttgagttggctccaattgaacatccggatt 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 258 cgggaaatttatacaaaccatggtatcatcttgagttggctccaattgaacatccggatt 317 Query: 324 ttgttcaatatttctccgaaagaacccacgatatataccagcgtttaaaagcgatagtgg 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 318 ttgttcaatatttctccgaaagaacccacgatatataccagcgtttaaaagcgatagtgg 377 Query: 384 aactatttcctactcaggattccatttatcaaaatgccaatattttgatagaccttcggt 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 378 aactatttcctactcaggattccatttatcaaaatgccaatattttgatagaccttcggt 437 Query: 444 tggactacttcaatgacacggactttatacggcaactatcacagcattggttcgagaaac 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 438 tggactacttcaatgacacggactttatacggcaactatcacagcattggttcgagaaac 497 Query: 504 ctgtcatacccagttatatagaccttagtttcttattttaaacgagatatacgtttaaaa 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 498 ctgtcatacccagttatatagaccttagtttcttattttaaacgagatatacgtttaaaa 557 Query: 564 caggtttctacttaaatatacatagtttaattaactctccgaaagtatacatctaaatta 623 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 558 caggtttctacttaaatatacatagtttaattaactctccgaaagtatacatctaaatta 617 Query: 624 tgagccaaacaactgacccaataattgttataccaattacagcggtgatgataccagcac 683 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 618 tgagccaaacaactgacccaataattgttataccaattacagcggtgatgataccagcac 677 Query: 684 cggcttggtcacctttaccgattgttaagggtgccaaattagttggagattgttcggtac 743 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 678 cggcttggtcacctttaccgattgttaagggtgccaaattagttggagattgttcggtac 737 Query: 744 ctgcagctgggttaccagccgaagtaccaccgtcgtcagctgtgtatggagcaggcctgt 803 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 738 ctgcagctgggttaccagccgaagtaccaccgtcgtcagctgtgtatggagcaggcctgt 797 Query: 804 ccaaacatctntagttttgcataacttctaatgcagccatttgtttcacctaaa-catat 862 |||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 798 ccaaacatcttaggttttgcataacttctaatgcagccatttg-ttcacctaaaccatat 856 Query: 863 ttaccgt-ccattcaccgtagaaacagttcaaacccacagtatggccatcagtaccacct 921 ||||||| |||| |||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 857 ttaccgtcccatccaccgtagaaccagttcaaaccacaagtatggccatcagtaccacct 916 Query: 922 tgacatgaatcagcagcaccttgagccgatgcttg 956 ||||||||||||||||||||||||||||||||| Sbjct: 917 gaacatgaatcagcagcaccttgagccgatgcttg 951 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 11,124 Number of Sequences: 1807 Number of extensions: 11124 Number of successful extensions: 71 Number of sequences better than 1.0e-20: 1 length of query: 956 length of database: 10,358,551 effective HSP length: 16 effective length of query: 940 effective length of database: 10,329,639 effective search space: 9709860660 effective search space used: 9709860660 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)