BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC16ZA07RM1.SCF screened BAC_end (918 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1144 1471 0.0 >3x_Contig1144 Length = 4618 Score = 1471 bits (742), Expect = 0.0 Identities = 806/822 (98%), Gaps = 4/822 (0%) Strand = Plus / Plus Query: 47 tgtttgatctttgttgacttcttcgtcattaagtttcaaaatcgctggtgaacggcagaa 106 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1279 tgtttgatctttgttgacttcgtcgtcattaagtttcaaaatcgctggtgaacggcagaa 1338 Query: 107 ttgctgcttcaagtgttggatatcgtcatttagagtggcactcatcaagaaagtttgtaa 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1339 ttgctgcttcaagtgttggatatcgtcatttagagtggcactcatcaagaaagtttgttt 1398 Query: 167 actctttctcaatggtaagcgttctgaaatcttcgtaaggtcctcttggtatccgaaagt 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1399 tttctttctcaatggtaagcgttctgaaatcttcgtaaggtcctcttggtatccgaaagt 1458 Query: 227 taacaccaaatcaacttcatcgataaccaagaacttcaacctgtcaatattaacatcttg 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1459 taacaccaaatcaacttcatcgataaccaagaacttcaacctgtcaatattaacatcttg 1518 Query: 287 cgcatctagtaaatctactaacttggccggcgtagctatcaatatttctggattttcggt 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1519 cgcatctagtaaatctactaacttggccggcgtagctatcaatatttctggattttcggt 1578 Query: 347 aagtaaagatttcaataagtttcccgatacattacccgatgaaagatttaagcatttaat 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1579 aagtaaagatttcaataagtttcccgatacattacccgatgaaagatttaagcatttaat 1638 Query: 407 ttcttgagaacagaaaacaatgagcttttcaacaacttctaaaacttgctgagccaattc 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1639 ttcttgagaacagaaaacaatgagcttttcaacaacttctaaaacttgctgagccaattc 1698 Query: 467 tctagttgggaccaatattacccctagagtggcaccttcatcattctgatctgccttctt 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1699 tctagttgggaccaatattacccctagagtggcaccttcatcattctgatctgccttctt 1758 Query: 527 atgatctaaaattgtttgaatcactggtatcaaatatgctaaagttttaccagagccggt 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1759 atgatctaaaattgtttgaatcactggtatcaaatatgctaaagttttaccagagccggt 1818 Query: 587 actagctttcgctatgatatcccttttctcttgaagagctaatggtatcgcactggattg 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1819 actagctttcgctatgatatcccttttctcttgaagagctaatggtatcgcactggattg 1878 Query: 647 gatcaaagtagggtgtttgaagccgatactgcggatggcttgtgataaacgtgaatccaa 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1879 gatcaaagtagggtgtttgaagccgatactgcggatggcttgtgataaacgtgaatccaa 1938 Query: 707 gtggaacgaatcgaaagaagaagaatcatcaatgtatccctgggaagcgcttgtttgagc 766 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1939 gtggaacgaatcgaaagaagaagaatcatcaatgtatccctgggaagcgcttgtttgagc 1998 Query: 767 catattgtagcgtttttcttaactctagctcttgtcgaacactttaactattaccctcgg 826 ||||||| ||||||||||| ||||||||||| ||||||||||||||||| || |||||| Sbjct: 1999 catattgaagcgtttttctggactctagctctcgtcgaacactttaacta-taacctcgg 2057 Query: 827 tttgtagttttcgatcaaaagggttaatgcttgctgatagtt 868 ||||| |||||||||||| ||||||||| ||||||||||| Sbjct: 2058 -ttgtaagtttcgatcaaaa-ggttaatgc-tgctgatagtt 2096 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7774 Number of Sequences: 1807 Number of extensions: 7774 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 918 length of database: 10,358,551 effective HSP length: 16 effective length of query: 902 effective length of database: 10,329,639 effective search space: 9317334378 effective search space used: 9317334378 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)