BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC16ZA07RM1.SCF screened BAC_end
         (918 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1144                                                        1471   0.0  

>3x_Contig1144 
          Length = 4618

 Score = 1471 bits (742), Expect = 0.0
 Identities = 806/822 (98%), Gaps = 4/822 (0%)
 Strand = Plus / Plus

                                                                        
Query: 47   tgtttgatctttgttgacttcttcgtcattaagtttcaaaatcgctggtgaacggcagaa 106
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1279 tgtttgatctttgttgacttcgtcgtcattaagtttcaaaatcgctggtgaacggcagaa 1338

                                                                        
Query: 107  ttgctgcttcaagtgttggatatcgtcatttagagtggcactcatcaagaaagtttgtaa 166
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 1339 ttgctgcttcaagtgttggatatcgtcatttagagtggcactcatcaagaaagtttgttt 1398

                                                                        
Query: 167  actctttctcaatggtaagcgttctgaaatcttcgtaaggtcctcttggtatccgaaagt 226
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1399 tttctttctcaatggtaagcgttctgaaatcttcgtaaggtcctcttggtatccgaaagt 1458

                                                                        
Query: 227  taacaccaaatcaacttcatcgataaccaagaacttcaacctgtcaatattaacatcttg 286
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1459 taacaccaaatcaacttcatcgataaccaagaacttcaacctgtcaatattaacatcttg 1518

                                                                        
Query: 287  cgcatctagtaaatctactaacttggccggcgtagctatcaatatttctggattttcggt 346
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1519 cgcatctagtaaatctactaacttggccggcgtagctatcaatatttctggattttcggt 1578

                                                                        
Query: 347  aagtaaagatttcaataagtttcccgatacattacccgatgaaagatttaagcatttaat 406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1579 aagtaaagatttcaataagtttcccgatacattacccgatgaaagatttaagcatttaat 1638

                                                                        
Query: 407  ttcttgagaacagaaaacaatgagcttttcaacaacttctaaaacttgctgagccaattc 466
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1639 ttcttgagaacagaaaacaatgagcttttcaacaacttctaaaacttgctgagccaattc 1698

                                                                        
Query: 467  tctagttgggaccaatattacccctagagtggcaccttcatcattctgatctgccttctt 526
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1699 tctagttgggaccaatattacccctagagtggcaccttcatcattctgatctgccttctt 1758

                                                                        
Query: 527  atgatctaaaattgtttgaatcactggtatcaaatatgctaaagttttaccagagccggt 586
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1759 atgatctaaaattgtttgaatcactggtatcaaatatgctaaagttttaccagagccggt 1818

                                                                        
Query: 587  actagctttcgctatgatatcccttttctcttgaagagctaatggtatcgcactggattg 646
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1819 actagctttcgctatgatatcccttttctcttgaagagctaatggtatcgcactggattg 1878

                                                                        
Query: 647  gatcaaagtagggtgtttgaagccgatactgcggatggcttgtgataaacgtgaatccaa 706
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1879 gatcaaagtagggtgtttgaagccgatactgcggatggcttgtgataaacgtgaatccaa 1938

                                                                        
Query: 707  gtggaacgaatcgaaagaagaagaatcatcaatgtatccctgggaagcgcttgtttgagc 766
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1939 gtggaacgaatcgaaagaagaagaatcatcaatgtatccctgggaagcgcttgtttgagc 1998

                                                                        
Query: 767  catattgtagcgtttttcttaactctagctcttgtcgaacactttaactattaccctcgg 826
            ||||||| |||||||||||  ||||||||||| ||||||||||||||||| || ||||||
Sbjct: 1999 catattgaagcgtttttctggactctagctctcgtcgaacactttaacta-taacctcgg 2057

                                                      
Query: 827  tttgtagttttcgatcaaaagggttaatgcttgctgatagtt 868
             |||||  |||||||||||| ||||||||| |||||||||||
Sbjct: 2058 -ttgtaagtttcgatcaaaa-ggttaatgc-tgctgatagtt 2096


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7774
Number of Sequences: 1807
Number of extensions: 7774
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 918
length of database: 10,358,551
effective HSP length: 16
effective length of query: 902
effective length of database: 10,329,639
effective search space: 9317334378
effective search space used: 9317334378
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)