BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC16ZB03FM1.SCF screened BAC_end (974 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1690 1576 0.0 >3x_Contig1690 Length = 13018 Score = 1576 bits (795), Expect = 0.0 Identities = 875/894 (97%), Gaps = 6/894 (0%) Strand = Plus / Plus Query: 85 tctgcctacgttctgtcgtaatgtacccttttttttgctctgaaaacgtttttgctctta 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11859 tctgcctacgttctgtcgtaatgtacccttttttttgctctgaaaacgtttttgctctta 11918 Query: 145 gctatttaaagggacatacaggcttttcttaagacaaagaccaacctcattttgcgtaat 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11919 gctatttaaagggacatacaggcttttcttaagacaaagaccaacctcattttgcgtaat 11978 Query: 205 tgagtgtagtg-tttataactgccagttggaaaaaggacagtgcaaaacagtggaaatca 263 ||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 11979 tgagtgtagtggtttaaagctgccagttggaaaaaggacagtgcaaaacagtggaaatca 12038 Query: 264 atgaggaaggggttcttagtttggagggtgtgagtcttccacaatgatctaagaaagcca 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12039 atgaggaaggggttcttagtttggagggtgtgagtcttccacaatgatctaagaaagcca 12098 Query: 324 tagaatataatctccattggcgatgttgtcgacatcttgagaaatgcagacagagatagt 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12099 tagaatataatctccattggcgatgttgtcgacatcttgagaaatgcagacagagatagt 12158 Query: 384 tacgtaaacctaagtaaaggatccagagcttctattggtgtgctgtatctacacgttacc 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12159 tacgtaaacctaagtaaaggatccagagcttctattggtgtgctgtatctacacgttacc 12218 Query: 444 gatccaccaagaacaagggtaaaaaaaaagtagctgtttaacttaactccatattgttgg 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12219 gatccaccaagaacaagggtaaaaaaaaagtagctgtttaacttaactccatattgttgg 12278 Query: 504 agttagttttccagtttgcaagagtatagttgtccgaatagcatcgttttttttttttgt 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12279 agttagttttccagtttgcaagagtatagttgtccgaatagcatcgttttttttttttgt 12338 Query: 564 tttcacaattcttggtgtagtttatttctggatttgctattagctaagacgggtatccgg 623 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12339 tttcacaattcttggtgtagtttatttctggatttgctattagctaagacgggtatccgg 12398 Query: 624 cagggaacccgacttgtttcggcatgactgctggatgggcaaatatatgtaaatatatat 683 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12399 cagggaacccgacttgtttcggcatgactgctggatgggcaaatatatgtaaatatatat 12458 Query: 684 aagggatgtatcttgattgaattaaacaacggtaagtttaaatatatatatatatgtctt 743 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12459 aagggatgtatcttgattgaattaaacaacggtaagtttaaatatatatatatatgtctt 12518 Query: 744 gngcatacttttgattctgctttgcccgattttaagggtaaagagcatcatcgaccttaa 803 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12519 gggcatacttttgattctgctttgcccgattttaagggtaaagagcatcatcgaccttaa 12578 Query: 804 gtatagtgaaag-attaaggtaagaag-aaaaaaaacccagaagttaagaaactaagtac 861 |||||||||||| |||||||||||||| |||||||||| |||||| |||||||||||||| Sbjct: 12579 gtatagtgaaagaattaaggtaagaagaaaaaaaaaccaagaagtaaagaaactaagtac 12638 Query: 862 gtcgtaacatgtcgaacaaagttattatcgtaggtgttgctgttgcagcagcccgttatt 921 |||| ||||||||||||| ||||||||||| |||||||||||||||||||||| | |||| Sbjct: 12639 gtcgaaacatgtcgaacagagttattatcggaggtgttgctgttgcagcagccggatatt 12698 Query: 922 gtgttg-tacgaacgttaagttcagttgaaac-acagccaaagggggctgttcc 973 ||||| ||||||||| ||||||||||||||| ||||| ||| ||||||||||| Sbjct: 12699 -tgttgttacgaacgtcaagttcagttgaaacaacagcaaaatggggctgttcc 12751 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 17,192 Number of Sequences: 1807 Number of extensions: 17192 Number of successful extensions: 374 Number of sequences better than 1.0e-20: 1 length of query: 974 length of database: 10,358,551 effective HSP length: 16 effective length of query: 958 effective length of database: 10,329,639 effective search space: 9895794162 effective search space used: 9895794162 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)