BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC16ZB03RM1.SCF screened BAC_end
         (934 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1688                                                        1544   0.0  

>3x_Contig1688 
          Length = 18058

 Score = 1544 bits (779), Expect = 0.0
 Identities = 864/883 (97%), Gaps = 7/883 (0%)
 Strand = Plus / Plus

                                                                        
Query: 47   cttcttccatcatcaatatcag-ataaacattctttttcaacactttatcgacaattgga 105
            |||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||
Sbjct: 2954 cttcttccatcatcaatatcagtaaaaacattctttttcaacactttatagacaattgga 3013

                                                                        
Query: 106  aaggcaattgcaacattatcattcagctgcatacagttcgatgaattataatgcagcatg 165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3014 aaggcaattgcaacattatcattcagctgcatacagttcgatgaattataatgcagcatg 3073

                                                                        
Query: 166  tttgtgaatcggctcgaattgaaaattttacaccaaaaggtcaacgaagtatcttttttt 225
            ||||||||||||||||||||||||||||||||||||||||||||||||||| |    || 
Sbjct: 3074 tttgtgaatcggctcgaattgaaaattttacaccaaaaggtcaacgaagtagcaaggttg 3133

                                                                        
Query: 226  gagagatctgataacttgataaagtagtaaatgacgtcatccaaattaatagtgagaacg 285
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3134 gagagatctgataacttgataaagtagtaaatgacgtcatccaaattaatagtgagaacg 3193

                                                                        
Query: 286  tttgggaattttcggcctaacaggtccgcggctatatcaaagatgaggtctttcacgcct 345
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3194 tttgggaattttcggcctaacaggtccgcggctatatcaaagatgaggtctttcacgcct 3253

                                                                        
Query: 346  gaatcaacatatgataaggcaatagtaggagctatgtatttagtaagaagcgcctcttgt 405
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3254 gaatcaacatatgataaggcaatagtaggagctatgtatttagtaagaagcgcctcttgt 3313

                                                                        
Query: 406  ttcaagttcagtaatttctttagatggtctataatgtaatagtaggttgatgattttgcg 465
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3314 ttcaagttcagtaatttctttagatggtctataatgtaatagtaggttgatgattttgcg 3373

                                                                        
Query: 466  aagaaaaaactcgttagctccatttgatatctgatacaaaactcgtcaaactcaaactca 525
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3374 aagaaaaaactcgttagctccatttgatatctgatacaaaactcgtcaaactcaaactca 3433

                                                                        
Query: 526  aaaagttccactttccatatgctcggttcatatatcttggatttggcagactttgtaaac 585
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3434 aaaagttccactttccatatgctcggttcatatatcttggatttggcagactttgtaaac 3493

                                                                        
Query: 586  cactggtctataataaaatatctgcattgatgaaagagatcttgtttagaacaaaggcca 645
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3494 cactggtctataataaaatatctgcattgatgaaagagatcttgtttagaacaaaggcca 3553

                                                                        
Query: 646  taaaaagttgagatcgtatccaaacttttttcaacatataagagaagatgagagaagttt 705
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3554 taaaaagttgagatcgtatccaaacttttttcaacatataagagaagatgagagaagttt 3613

                                                                        
Query: 706  gtgttatctaacagatgtaagatagagttgagcaaataaaactcattgataagggataat 765
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3614 gtgttatctaacagatgtaagatagagttgagcaaataaaactcattgataagggataat 3673

                                                                        
Query: 766  ttcgtacatgtcaacgaaaaaaatgcagcagtttcaaccgactcttgaggaggattgaat 825
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3674 ttcgtacatgtcaacgaaaaaaatgcagcagtttcaaccgactcttgaggaggattgaat 3733

                                                                        
Query: 826  ctctgaagtag-tctttgaataa-atacgttgattagtaacacc-acccctttgacata- 881
            ||||||||||| ||||||||||| |||||||||||||||||||| |||| ||||||||| 
Sbjct: 3734 ctctgaagtagttctttgaataatatacgttgattagtaacaccaacccttttgacatag 3793

                                                       
Query: 882  gtttcgagcagagat-cttacctgttcgtcaag-atttcggca 922
            ||| ||||||||||| ||  ||||||||||||| |||||||||
Sbjct: 3794 gttccgagcagagatactaccctgttcgtcaagtatttcggca 3836


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8017
Number of Sequences: 1807
Number of extensions: 8017
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 934
length of database: 10,358,551
effective HSP length: 16
effective length of query: 918
effective length of database: 10,329,639
effective search space: 9482608602
effective search space used: 9482608602
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)