BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC16ZB03RM1.SCF screened BAC_end (934 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1688 1544 0.0 >3x_Contig1688 Length = 18058 Score = 1544 bits (779), Expect = 0.0 Identities = 864/883 (97%), Gaps = 7/883 (0%) Strand = Plus / Plus Query: 47 cttcttccatcatcaatatcag-ataaacattctttttcaacactttatcgacaattgga 105 |||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||| Sbjct: 2954 cttcttccatcatcaatatcagtaaaaacattctttttcaacactttatagacaattgga 3013 Query: 106 aaggcaattgcaacattatcattcagctgcatacagttcgatgaattataatgcagcatg 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3014 aaggcaattgcaacattatcattcagctgcatacagttcgatgaattataatgcagcatg 3073 Query: 166 tttgtgaatcggctcgaattgaaaattttacaccaaaaggtcaacgaagtatcttttttt 225 ||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 3074 tttgtgaatcggctcgaattgaaaattttacaccaaaaggtcaacgaagtagcaaggttg 3133 Query: 226 gagagatctgataacttgataaagtagtaaatgacgtcatccaaattaatagtgagaacg 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3134 gagagatctgataacttgataaagtagtaaatgacgtcatccaaattaatagtgagaacg 3193 Query: 286 tttgggaattttcggcctaacaggtccgcggctatatcaaagatgaggtctttcacgcct 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3194 tttgggaattttcggcctaacaggtccgcggctatatcaaagatgaggtctttcacgcct 3253 Query: 346 gaatcaacatatgataaggcaatagtaggagctatgtatttagtaagaagcgcctcttgt 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3254 gaatcaacatatgataaggcaatagtaggagctatgtatttagtaagaagcgcctcttgt 3313 Query: 406 ttcaagttcagtaatttctttagatggtctataatgtaatagtaggttgatgattttgcg 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3314 ttcaagttcagtaatttctttagatggtctataatgtaatagtaggttgatgattttgcg 3373 Query: 466 aagaaaaaactcgttagctccatttgatatctgatacaaaactcgtcaaactcaaactca 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3374 aagaaaaaactcgttagctccatttgatatctgatacaaaactcgtcaaactcaaactca 3433 Query: 526 aaaagttccactttccatatgctcggttcatatatcttggatttggcagactttgtaaac 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3434 aaaagttccactttccatatgctcggttcatatatcttggatttggcagactttgtaaac 3493 Query: 586 cactggtctataataaaatatctgcattgatgaaagagatcttgtttagaacaaaggcca 645 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3494 cactggtctataataaaatatctgcattgatgaaagagatcttgtttagaacaaaggcca 3553 Query: 646 taaaaagttgagatcgtatccaaacttttttcaacatataagagaagatgagagaagttt 705 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3554 taaaaagttgagatcgtatccaaacttttttcaacatataagagaagatgagagaagttt 3613 Query: 706 gtgttatctaacagatgtaagatagagttgagcaaataaaactcattgataagggataat 765 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3614 gtgttatctaacagatgtaagatagagttgagcaaataaaactcattgataagggataat 3673 Query: 766 ttcgtacatgtcaacgaaaaaaatgcagcagtttcaaccgactcttgaggaggattgaat 825 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3674 ttcgtacatgtcaacgaaaaaaatgcagcagtttcaaccgactcttgaggaggattgaat 3733 Query: 826 ctctgaagtag-tctttgaataa-atacgttgattagtaacacc-acccctttgacata- 881 ||||||||||| ||||||||||| |||||||||||||||||||| |||| ||||||||| Sbjct: 3734 ctctgaagtagttctttgaataatatacgttgattagtaacaccaacccttttgacatag 3793 Query: 882 gtttcgagcagagat-cttacctgttcgtcaag-atttcggca 922 ||| ||||||||||| || ||||||||||||| ||||||||| Sbjct: 3794 gttccgagcagagatactaccctgttcgtcaagtatttcggca 3836 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8017 Number of Sequences: 1807 Number of extensions: 8017 Number of successful extensions: 37 Number of sequences better than 1.0e-20: 1 length of query: 934 length of database: 10,358,551 effective HSP length: 16 effective length of query: 918 effective length of database: 10,329,639 effective search space: 9482608602 effective search space used: 9482608602 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)