BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC16ZB11FM1.SCF screened BAC_end (932 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1244 1584 0.0 >3x_Contig1244 Length = 4689 Score = 1584 bits (799), Expect = 0.0 Identities = 844/851 (99%), Gaps = 6/851 (0%) Strand = Plus / Minus Query: 86 caagactagtagcaaaactggtggtaaagctcgtaaagcccgtcataagaaaggtgccat 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2194 caagactagtagcaaaactggtggtaaagctcgtaaagcccgtcataagaaaggtgccat 2135 Query: 146 gtctgacgtctctggattctcaatgagttcaagtgcacttgcacgtacagaagtgatgac 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2134 gtctgacgtctctggattctcaatgagttcaagtgcacttgcacgtacagaagtgatgac 2075 Query: 206 tgtgttagatgatataatacgatcaaatcatcggaggatatgaaaactatgaagaagagt 265 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2074 tgtgttagatgata-aatacgatcaaatcatcggaggatatgaaaactatgaagaagagt 2016 Query: 266 tagctgaagatgaagagaaacatgaaagctttgatatgctcaaagaacgtccagatctcg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2015 tagctgaagatgaagagaaacatgaaagctttgatatgctcaaagaacgtccagatctcg 1956 Query: 326 aatctatgctcgacgatttcctggataattatgaacttggaagtggtaatagaaagctag 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1955 aatctatgctcgacgatttcctggataattatgaacttggaagtggtaatagaaagctag 1896 Query: 386 ttaagaaggatgaagagatcgccagactaaaagaagctgctgacgaagtcagcaaaggta 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1895 ttaagaaggatgaagagatcgccagactaaaagaagctgctgacgaagtcagcaaaggta 1836 Query: 446 agctatcgatgagaagaaaaagggaaaaggagaagaaatccgtgaaagggattacaaatg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1835 agctatcgatgagaagaaaaagggaaaaggagaagaaatccgtgaaagggattacaaatg 1776 Query: 506 gacttaacagtctcaagttttaaacagttcctcttttcatctgcttctcaatttgctttc 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1775 gacttaacagtctcaagttttaaacagttcctcttttcatctgcttctcaatttgctttc 1716 Query: 566 ttatgatacttttatacatagatcggtcaaattcaccatttatttcgcacttaattataa 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1715 ttatgatacttttatacatagatcggtcaaattcaccatttatttcgcacttaattataa 1656 Query: 626 agatctatagattcaattccaacataatataatcggaaccttcttgaacactccagtagt 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1655 agatctatagattcaattccaacataatataatcggaaccttcttgaacactccagtagt 1596 Query: 686 tgtttagtctagtgacatctaacctgccttttctttgtctcgatgtgttgcaatatcgat 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1595 tgtttagtctagtgacatctaacctgccttttctttgtctcgatgtgttgcaatatcgat 1536 Query: 746 attaaaatttagtactatttatgaaactatcaacaattcaaaatgatggccatacccttc 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1535 attaaaatttagtactatttatgaaactatcaacaattcaaaatgatggccatacccttc 1476 Query: 806 aaaaagagaatattaacaaggaaagaggaaagctactgttgataga-gtatttctaatct 864 |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1475 aaaaagagaatattaacaaggaaagaggaaagctactg-tgatagaggtatttctaatct 1417 Query: 865 cgaattgc-cactattgatttaccaccatgagtgacgaaatttcc-agttaagaaacc-a 921 |||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||| | Sbjct: 1416 cgaattgcacactattgattaaccaccatgagtgacgaaatttccaagttaagaaaccaa 1357 Query: 922 gttctagagct 932 ||||||||||| Sbjct: 1356 gttctagagct 1346 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7733 Number of Sequences: 1807 Number of extensions: 7733 Number of successful extensions: 60 Number of sequences better than 1.0e-20: 1 length of query: 932 length of database: 10,358,551 effective HSP length: 16 effective length of query: 916 effective length of database: 10,329,639 effective search space: 9461949324 effective search space used: 9461949324 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)