BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FJ0AC16ZC01FM1.SCF screened BAC_end
(972 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1509 1679 0.0
>3x_Contig1509
Length = 8584
Score = 1679 bits (847), Expect = 0.0
Identities = 878/888 (98%), Gaps = 1/888 (0%)
Strand = Plus / Minus
Query: 86 ttcttccaatgactaaagagttatcatcgtcgttcaccgtatcataacttcaaaacgaaa 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8035 ttcttccaatgactaaagagttatcatcgtcgttcaccgtatcataacttcaaaacgaaa 7976
Query: 146 gtaactctttaccttcatgtgtatgttctgtagtgttctctgtctctgtttggacggact 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7975 gtaactctttaccttcatgtgtatgttctgtagtgttctctgtctctgtttggacggact 7916
Query: 206 tttatcaattttggaacgatgacagagacaaaataaccgcatagataaacaaacaaacaa 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7915 tttatcaattttggaacgatgacagagacaaaataaccgcatagataaacaaacaaacaa 7856
Query: 266 acaaacggagcacgatacacgtaactggacaagaaactgcaaacagtatggatctggaat 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7855 acaaacggagcacgatacacgtaactggacaagaaactgcaaacagtatggatctggaat 7796
Query: 326 cagagatcattcaactggtacggcaaaacataagaccaaaatttccttctttgaatgatg 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7795 cagagatcattcaactggtacggcaaaacataagaccaaaatttccttctttgaatgatg 7736
Query: 386 aacaacaagcaagattggacaatgcactgaagtatgatgtgaactacgatatattgaaga 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7735 aacaacaagcaagattggacaatgcactgaagtatgatgtgaactacgatatattgaaga 7676
Query: 446 aagagctagtcgaatatatagatgattggaaacgaaatgaatactatgatgtcttgacaa 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7675 aagagctagtcgaatatatagatgattggaaacgaaatgaatactatgatgtcttgacaa 7616
Query: 506 atatcggtgatttacaacgtctagatttgggaaatatgttgaacggagatggagttagtt 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7615 atatcggtgatttacaacgtctagatttgggaaatatgttgaacggagatggagttagtt 7556
Query: 566 ttcccaagttacacagtgatctagccaacctacctagattcagacttatcgataatgaaa 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7555 ttcccaagttacacagtgatctagccaacctacctagattcagacttatcgataatgaaa 7496
Query: 626 atgaaatggatcaaagtctcctacataagtatgactctttaaggacaagactaatcgaaa 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7495 atgaaatggatcaaagtctcctacataagtatgactctttaaggacaagactaatcgaaa 7436
Query: 686 aatgcagagccattgagcttatacgaagtgcaacaaatactgatgttaattaccaggata 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7435 aatgcagagccattgagcttatacgaagtgcaacaaatactgatgttaattaccaggata 7376
Query: 746 tcaattccatgttatccgttgtggaactgangacatggcgagatgagatccaaatggaat 805
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 7375 tcaattccatgttatccgttgtggaactgagacaatggcgagatgagatccaaatggaat 7316
Query: 806 ggaaagaactggctcaaaatctcgaattaattntg-aaacttggcctgatttaacagaaa 864
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 7315 ggaaagaactggctcaaaatctcgaattaattttgaaaacttggcctgatttaacagaag 7256
Query: 865 gaaagcgatccaaactcttacagctaatcgactctagttcattgaaatcgatattgcaca 924
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7255 aaaagcgatccaaactcttacagctaatcgactctagttcattgaaatcgatattgcaca 7196
Query: 925 tcaaagataatatcgaatgaagacaaacagcgagcttngaaaaaaagt 972
||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 7195 tcaaagataatatcgaatgaagacaaacagcgagcttgaaaaaaaagt 7148
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7507
Number of Sequences: 1807
Number of extensions: 7507
Number of successful extensions: 78
Number of sequences better than 1.0e-20: 1
length of query: 972
length of database: 10,358,551
effective HSP length: 16
effective length of query: 956
effective length of database: 10,329,639
effective search space: 9875134884
effective search space used: 9875134884
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)