BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC16ZC05FM1.SCF screened BAC_end
         (948 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1486                                                        1628   0.0  

>3x_Contig1486 
          Length = 12131

 Score = 1628 bits (821), Expect = 0.0
 Identities = 856/866 (98%), Gaps = 2/866 (0%)
 Strand = Plus / Minus

                                                                        
Query: 83   tatcttcttctcctgttcagaaacactttgagtacaaatcaatgcactcttgatatctgg 142
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2959 tatcttcttctcctgttcagaaacactttgagtacaaatcaatgcactcttgatatctgg 2900

                                                                        
Query: 143  gatttgatacaacatcaatattgatcaatcacgtcgttcttgctcaacggtatctgctgt 202
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2899 gatttgatacaacatcaatattgatcaatcacgtcgttcttgctcaacggtatctgctgt 2840

                                                                        
Query: 203  ggcagtttttattattttccttttatagtgcataagtaagatcaaatgttttggttgatt 262
            |||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2839 ggcagtttttatgagtt-ccttttatagtgcataagtaagatcaaatgttttggttgatt 2781

                                                                        
Query: 263  caatatataaaatttttttaatatgttaacaataatcctattaaactaatatcaaacgaa 322
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2780 caatatataaaatttttttaatatgttaacaataatcctattaaactaatatcaaacgaa 2721

                                                                        
Query: 323  ttcaacatggcactagtgactgacattaataaaggataactgcgatctgattatagttac 382
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2720 ttcaacatggcactagtgactgacattaataaaggataactgcgatctgattatagttac 2661

                                                                        
Query: 383  actaacatcgaccttcaatacaccgaaagattctagaaaaagtctaaaatgtccggctct 442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2660 actaacatcgaccttcaatacaccgaaagattctagaaaaagtctaaaatgtccggctct 2601

                                                                        
Query: 443  aaagtaggagctcctatggtacctccaatcaattgcatatacaactaccttcatcatcag 502
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2600 aaagtaggagctcctatggtacctccaatcaattgcatatacaactaccttcatcatcag 2541

                                                                        
Query: 503  acaacagtaacgttttggttatacgaacaagtacagacacgtataagaggcaagatcaga 562
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2540 acaacagtaacgttttggttatacgaacaagtacagacacgtataagaggcaagatcaga 2481

                                                                        
Query: 563  ggctttgatgagttcatgaatgtggtaatagatgacgctttcgaaatagctgtagatccg 622
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2480 ggctttgatgagttcatgaatgtggtaatagatgacgctttcgaaatagctgtagatccg 2421

                                                                        
Query: 623  aaaagtggtaaagagagcgatgataaagcagtgtttcttgggagaattatgttgaatagg 682
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2420 aaaagtggtaaagagagcgatgataaagcagtgtttcttgggagaattatgttgaa-agg 2362

                                                                        
Query: 683  tgataatataacacttgttgtggcaaattgataatgcctactcagaanatgataatagga 742
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2361 tgataatataacacttgttgtggcaaattgataatgcctactcagaaaatgataatagga 2302

                                                                        
Query: 743  tgaaagaaagatgcttagagtgtagaagcattgatcggactctgtcgtgtaattatataa 802
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2301 tgaaagaaagatgcttagagtgtagaagcattgatcggactctgtcgtgtaattatataa 2242

                                                                        
Query: 803  gcctgtatattataacggnaaaatganaggcactgaaatttcgataacggcgaccagcac 862
            |||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 2241 gcctgtatattataacggaaaaatgaaaggcactgaaatttcgataacggcgacaagcac 2182

                                                                        
Query: 863  tatcaaggctaataaagatatattgttcgtaatcttatggatctatttacaatgtgttgc 922
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2181 tatcaaggctaataaagatatattgttcgtaatcttatggatctatttacaatgtgttgc 2122

                                      
Query: 923  tcaaattggggagaatactttaagtt 948
            ||| |||||||||||||| |||||||
Sbjct: 2121 tcagattggggagaataccttaagtt 2096


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7023
Number of Sequences: 1807
Number of extensions: 7023
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 948
length of database: 10,358,551
effective HSP length: 16
effective length of query: 932
effective length of database: 10,329,639
effective search space: 9627223548
effective search space used: 9627223548
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)