BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC16ZC05FM1.SCF screened BAC_end (948 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1486 1628 0.0 >3x_Contig1486 Length = 12131 Score = 1628 bits (821), Expect = 0.0 Identities = 856/866 (98%), Gaps = 2/866 (0%) Strand = Plus / Minus Query: 83 tatcttcttctcctgttcagaaacactttgagtacaaatcaatgcactcttgatatctgg 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2959 tatcttcttctcctgttcagaaacactttgagtacaaatcaatgcactcttgatatctgg 2900 Query: 143 gatttgatacaacatcaatattgatcaatcacgtcgttcttgctcaacggtatctgctgt 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2899 gatttgatacaacatcaatattgatcaatcacgtcgttcttgctcaacggtatctgctgt 2840 Query: 203 ggcagtttttattattttccttttatagtgcataagtaagatcaaatgttttggttgatt 262 |||||||||||| | || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2839 ggcagtttttatgagtt-ccttttatagtgcataagtaagatcaaatgttttggttgatt 2781 Query: 263 caatatataaaatttttttaatatgttaacaataatcctattaaactaatatcaaacgaa 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2780 caatatataaaatttttttaatatgttaacaataatcctattaaactaatatcaaacgaa 2721 Query: 323 ttcaacatggcactagtgactgacattaataaaggataactgcgatctgattatagttac 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2720 ttcaacatggcactagtgactgacattaataaaggataactgcgatctgattatagttac 2661 Query: 383 actaacatcgaccttcaatacaccgaaagattctagaaaaagtctaaaatgtccggctct 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2660 actaacatcgaccttcaatacaccgaaagattctagaaaaagtctaaaatgtccggctct 2601 Query: 443 aaagtaggagctcctatggtacctccaatcaattgcatatacaactaccttcatcatcag 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2600 aaagtaggagctcctatggtacctccaatcaattgcatatacaactaccttcatcatcag 2541 Query: 503 acaacagtaacgttttggttatacgaacaagtacagacacgtataagaggcaagatcaga 562 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2540 acaacagtaacgttttggttatacgaacaagtacagacacgtataagaggcaagatcaga 2481 Query: 563 ggctttgatgagttcatgaatgtggtaatagatgacgctttcgaaatagctgtagatccg 622 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2480 ggctttgatgagttcatgaatgtggtaatagatgacgctttcgaaatagctgtagatccg 2421 Query: 623 aaaagtggtaaagagagcgatgataaagcagtgtttcttgggagaattatgttgaatagg 682 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2420 aaaagtggtaaagagagcgatgataaagcagtgtttcttgggagaattatgttgaa-agg 2362 Query: 683 tgataatataacacttgttgtggcaaattgataatgcctactcagaanatgataatagga 742 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2361 tgataatataacacttgttgtggcaaattgataatgcctactcagaaaatgataatagga 2302 Query: 743 tgaaagaaagatgcttagagtgtagaagcattgatcggactctgtcgtgtaattatataa 802 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2301 tgaaagaaagatgcttagagtgtagaagcattgatcggactctgtcgtgtaattatataa 2242 Query: 803 gcctgtatattataacggnaaaatganaggcactgaaatttcgataacggcgaccagcac 862 |||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 2241 gcctgtatattataacggaaaaatgaaaggcactgaaatttcgataacggcgacaagcac 2182 Query: 863 tatcaaggctaataaagatatattgttcgtaatcttatggatctatttacaatgtgttgc 922 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2181 tatcaaggctaataaagatatattgttcgtaatcttatggatctatttacaatgtgttgc 2122 Query: 923 tcaaattggggagaatactttaagtt 948 ||| |||||||||||||| ||||||| Sbjct: 2121 tcagattggggagaataccttaagtt 2096 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7023 Number of Sequences: 1807 Number of extensions: 7023 Number of successful extensions: 51 Number of sequences better than 1.0e-20: 1 length of query: 948 length of database: 10,358,551 effective HSP length: 16 effective length of query: 932 effective length of database: 10,329,639 effective search space: 9627223548 effective search space used: 9627223548 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)