BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC16ZC06FM1.SCF screened BAC_end
         (964 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1776                                                        1600   0.0  

>3x_Contig1776 
          Length = 26138

 Score = 1600 bits (807), Expect = 0.0
 Identities = 846/855 (98%), Gaps = 3/855 (0%)
 Strand = Plus / Minus

                                                                        
Query: 83   gtgtgatctggtaattcattaacaagattttgcctcacccattttctaaatctcctttta 142
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4458 gtgtgatctggtaattcattaacaagattttgcctcacccattttctaaatctcctttta 4399

                                                                        
Query: 143  taccgtaagaatcaataccagaaagcatctgaaacagatgtgaaacatcaacaaaaaaaa 202
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 4398 taccgtaagaatcaataccagaaagcagctgaaacagatgtgaaacatcaacaaaaaaaa 4339

                                                                        
Query: 203  atgtcactatattatttttatttacagtaattcgggagtaaggtttaaattgttttagta 262
            ||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4338 atgtcactatattagcactatttacagtaattcgggagtaaggtttaaattgttttagta 4279

                                                                        
Query: 263  atctataacatgtgtttgaacaatctatcattttgaatgttggaaactatgctctattgt 322
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4278 atctataacatgtgtttgaacaatctatcattttgaatgttggaaactatgctctattgt 4219

                                                                        
Query: 323  tcaaaaagtgcagtagcgtctctctatcaactccagtaaatccaaactgatcaataaagg 382
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4218 tcaaaaagtgcagtagcgtctctctatcaactccagtaaatccaaactgatcaataaagg 4159

                                                                        
Query: 383  tggtttgatttttgacaacttcgataactttggtgatctctttgacaggttgttcgttga 442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4158 tggtttgatttttgacaacttcgataactttggtgatctctttgacaggttgttcgttga 4099

                                                                        
Query: 443  taatggtctgtactgctctaaagttagagttagtgagtaatgctatgataaaagcaagaa 502
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4098 taatggtctgtactgctctaaagttagagttagtgagtaatgctatgataaaagcaagaa 4039

                                                                        
Query: 503  gatttgcattcggtacagttccattattgtatgccttaattctataatataatgaagaaa 562
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4038 gatttgcattcggtacagttccattattgtatgccttaattctataatataatgaagaaa 3979

                                                                        
Query: 563  tgttaagactattgtccacttgagagtccttcaactgtgcgattctaagcacgaagttgt 622
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3978 tgttaagactattgtccacttgagagtccttcaactgtgcgattctaagcacgaagttgt 3919

                                                                        
Query: 623  tgacacaagattttgcaatgtctttagagtattttgatttgagggctaagtccaacaaag 682
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3918 tgacacaagattttgcaatgtctttagagtattttgatttgagggctaagtccaacaaag 3859

                                                                        
Query: 683  caaatatctctgattggtgaatacagtatggtaacaggagatcagtcattctgcatgtta 742
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3858 caaatatctctgattggtgaatacagtatggtaacaggagatcagtcattctgcatgtta 3799

                                                                        
Query: 743  aattagaggcgaataccggggaaagtacgtgcaaaagataaagttttgattttctttcaa 802
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3798 aattagaggcgaataccggggaaagtacgtgcaaaagataaagttttgattttctttcaa 3739

                                                                        
Query: 803  gtggaacaatgcctgcatctgtttcctgaccagcctgtccgacgagttcaatgtattctt 862
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3738 gtggaacaatgcctgcatctgtttcctgaccagcctgtccgacgagttcaatgtattctt 3679

                                                                        
Query: 863  ctatggacggtagagatggcataatactgcgagatgcc-aagtttctagt-aaatccgcg 920
            ||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||
Sbjct: 3678 ctatggacggtagagatggcataatacggcgagatgccaaagtttctagtaaaatccgcg 3619

                           
Query: 921  aca-cttgatatcct 934
            ||| |||||||||||
Sbjct: 3618 acaccttgatatcct 3604


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8170
Number of Sequences: 1807
Number of extensions: 8170
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 964
length of database: 10,358,551
effective HSP length: 16
effective length of query: 948
effective length of database: 10,329,639
effective search space: 9792497772
effective search space used: 9792497772
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)