BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC16ZC06FM1.SCF screened BAC_end (964 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1776 1600 0.0 >3x_Contig1776 Length = 26138 Score = 1600 bits (807), Expect = 0.0 Identities = 846/855 (98%), Gaps = 3/855 (0%) Strand = Plus / Minus Query: 83 gtgtgatctggtaattcattaacaagattttgcctcacccattttctaaatctcctttta 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4458 gtgtgatctggtaattcattaacaagattttgcctcacccattttctaaatctcctttta 4399 Query: 143 taccgtaagaatcaataccagaaagcatctgaaacagatgtgaaacatcaacaaaaaaaa 202 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 4398 taccgtaagaatcaataccagaaagcagctgaaacagatgtgaaacatcaacaaaaaaaa 4339 Query: 203 atgtcactatattatttttatttacagtaattcgggagtaaggtttaaattgttttagta 262 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4338 atgtcactatattagcactatttacagtaattcgggagtaaggtttaaattgttttagta 4279 Query: 263 atctataacatgtgtttgaacaatctatcattttgaatgttggaaactatgctctattgt 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4278 atctataacatgtgtttgaacaatctatcattttgaatgttggaaactatgctctattgt 4219 Query: 323 tcaaaaagtgcagtagcgtctctctatcaactccagtaaatccaaactgatcaataaagg 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4218 tcaaaaagtgcagtagcgtctctctatcaactccagtaaatccaaactgatcaataaagg 4159 Query: 383 tggtttgatttttgacaacttcgataactttggtgatctctttgacaggttgttcgttga 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4158 tggtttgatttttgacaacttcgataactttggtgatctctttgacaggttgttcgttga 4099 Query: 443 taatggtctgtactgctctaaagttagagttagtgagtaatgctatgataaaagcaagaa 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4098 taatggtctgtactgctctaaagttagagttagtgagtaatgctatgataaaagcaagaa 4039 Query: 503 gatttgcattcggtacagttccattattgtatgccttaattctataatataatgaagaaa 562 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4038 gatttgcattcggtacagttccattattgtatgccttaattctataatataatgaagaaa 3979 Query: 563 tgttaagactattgtccacttgagagtccttcaactgtgcgattctaagcacgaagttgt 622 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3978 tgttaagactattgtccacttgagagtccttcaactgtgcgattctaagcacgaagttgt 3919 Query: 623 tgacacaagattttgcaatgtctttagagtattttgatttgagggctaagtccaacaaag 682 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3918 tgacacaagattttgcaatgtctttagagtattttgatttgagggctaagtccaacaaag 3859 Query: 683 caaatatctctgattggtgaatacagtatggtaacaggagatcagtcattctgcatgtta 742 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3858 caaatatctctgattggtgaatacagtatggtaacaggagatcagtcattctgcatgtta 3799 Query: 743 aattagaggcgaataccggggaaagtacgtgcaaaagataaagttttgattttctttcaa 802 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3798 aattagaggcgaataccggggaaagtacgtgcaaaagataaagttttgattttctttcaa 3739 Query: 803 gtggaacaatgcctgcatctgtttcctgaccagcctgtccgacgagttcaatgtattctt 862 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3738 gtggaacaatgcctgcatctgtttcctgaccagcctgtccgacgagttcaatgtattctt 3679 Query: 863 ctatggacggtagagatggcataatactgcgagatgcc-aagtttctagt-aaatccgcg 920 ||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||| Sbjct: 3678 ctatggacggtagagatggcataatacggcgagatgccaaagtttctagtaaaatccgcg 3619 Query: 921 aca-cttgatatcct 934 ||| ||||||||||| Sbjct: 3618 acaccttgatatcct 3604 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8170 Number of Sequences: 1807 Number of extensions: 8170 Number of successful extensions: 52 Number of sequences better than 1.0e-20: 1 length of query: 964 length of database: 10,358,551 effective HSP length: 16 effective length of query: 948 effective length of database: 10,329,639 effective search space: 9792497772 effective search space used: 9792497772 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)