BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC16ZC07RM1.SCF screened BAC_end (865 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1575 1576 0.0 >3x_Contig1575 Length = 11952 Score = 1576 bits (795), Expect = 0.0 Identities = 804/807 (99%) Strand = Plus / Minus Query: 47 tagctgtcctaccgtaatttttgaaactggttttgccaacatagaaaacaatccaggccg 106 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 5962 tagctgtcctaccgtaaagtttgaaactggttttgccaacatagaaaacaatccaggccg 5903 Query: 107 gttctcagtcccacgcatttcatagtacgcgtcagtataggtaaaatccaaaaaaaaaaa 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5902 gttctcagtcccacgcatttcatagtacgcgtcagtataggtaaaatccaaaaaaaaaaa 5843 Query: 167 aagttgaagatttcagaatattagcatagaggccaaaatccaacaaaaattatactctat 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5842 aagttgaagatttcagaatattagcatagaggccaaaatccaacaaaaattatactctat 5783 Query: 227 actttgcgtaggcatattttgccatactgaaaaagttccattttttttttttttaatgtt 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5782 actttgcgtaggcatattttgccatactgaaaaagttccattttttttttttttaatgtt 5723 Query: 287 ttaccctaaccaactgattcttttcaaagaaaaaatcatattcaagtcccacagaaaaga 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5722 ttaccctaaccaactgattcttttcaaagaaaaaatcatattcaagtcccacagaaaaga 5663 Query: 347 gggtagggtaaatctgccatatccttcaatttagatggaattggcggctaaaagacgaat 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5662 gggtagggtaaatctgccatatccttcaatttagatggaattggcggctaaaagacgaat 5603 Query: 407 tccatgaaatatagagaaacagcaagaaataatgccatctaagctatattgtaaacctcg 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5602 tccatgaaatatagagaaacagcaagaaataatgccatctaagctatattgtaaacctcg 5543 Query: 467 tagataagtttgatagaaacgatcaatcagattggaaaggaggcaaagttagagggtttc 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5542 tagataagtttgatagaaacgatcaatcagattggaaaggaggcaaagttagagggtttc 5483 Query: 527 ttagggaaggcggtctcttaattcctgtcacgtggcaataaattccctttcgattcttca 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5482 ttagggaaggcggtctcttaattcctgtcacgtggcaataaattccctttcgattcttca 5423 Query: 587 tacaactgtgagttggtactctcttttctgaagtcctgcttcaaaagatactggtagttt 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5422 tacaactgtgagttggtactctcttttctgaagtcctgcttcaaaagatactggtagttt 5363 Query: 647 gttgacacatacttatctgagttctaactagctagtttgggaaagttttggtttggtttg 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5362 gttgacacatacttatctgagttctaactagctagtttgggaaagttttggtttggtttg 5303 Query: 707 accagcgacaatacttagaaatggtcagtgtcttggcgacttcagtttacacaatttacc 766 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5302 accagcgacaatacttagaaatggtcagtgtcttggcgacttcagtttacacaatttacc 5243 Query: 767 cttctgtctcttatatgtatcgctttatatattctgattcctatttaattgaacttcctg 826 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 5242 cttctgtctcttatatgtatcgctttatatattctgattcctatttaattggacttcctg 5183 Query: 827 tcctttcatatttgccgccatgaccac 853 ||||||||||||||||||||||||||| Sbjct: 5182 tcctttcatatttgccgccatgaccac 5156 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 22,664 Number of Sequences: 1807 Number of extensions: 22664 Number of successful extensions: 520 Number of sequences better than 1.0e-20: 1 length of query: 865 length of database: 10,358,551 effective HSP length: 16 effective length of query: 849 effective length of database: 10,329,639 effective search space: 8769863511 effective search space used: 8769863511 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)