BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC16ZC09FM1.SCF screened BAC_end (985 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1442 1590 0.0 >3x_Contig1442 Length = 8270 Score = 1590 bits (802), Expect = 0.0 Identities = 857/869 (98%), Gaps = 5/869 (0%) Strand = Plus / Minus Query: 86 taacaaacgatcgtctccagatcaattgagctataactctttcaccactatgaagaaaaa 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5238 taacaaacgatcgtctccagatcaattgagctataactctttcaccactatgaagaaaaa 5179 Query: 146 tcacataaaaaaaccgtgaacctgaacaggaactttcaaaagtgcgttcttagtgaaaag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5178 tcacataaaaaaaccgtgaacctgaacaggaactttcaaaagtgcgttcttagtgaaaag 5119 Query: 206 aaaaaaacaccat-tgtattttcactggctcctgaacaacaccttatatttcaaaacaat 264 |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 5118 aaaaaaacaccaaatgtatcttcactggctcctgaacaacaccttatatttcaaaacaat 5059 Query: 265 aaagtcatctcatgaccatctattcgtaaaccaactgctcttctcttacttttacgtatg 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5058 aaagtcatctcatgaccatctattcgtaaaccaactgctcttctcttacttttacgtatg 4999 Query: 325 ttgagcctttccgatttctcaacatcccaacaaattcgcaaaaaccatgcgatgctgaag 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4998 ttgagcctttccgatttctcaacatcccaacaaattcgcaaaaaccatgcgatgctgaag 4939 Query: 385 agggaaatggtgttacccgaccattacgttatcatgagtagacacgtgaccgtaaagatc 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4938 agggaaatggtgttacccgaccattacgttatcatgagtagacacgtgaccgtaaagatc 4879 Query: 445 tttaggtgtcctcgctaaggtgatgatcggtatcacctggtgttcggtaccgctcagtgg 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4878 tttaggtgtcctcgctaaggtgatgatcggtatcacctggtgttcggtaccgctcagtgg 4819 Query: 505 ttgtatttggtgttgggatgatcgtatctccaaagcctgttgtggaaggagtagttggag 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4818 ttgtatttggtgttgggatgatcgtatctccaaagcctgttgtggaaggagtagttggag 4759 Query: 565 ggattgttgtagcttctgttgggttttgttgttgcggttgatgatgatggtggtgatgat 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4758 ggattgttgtagcttctgttgggttttgttgttgcggttgatgatgatggtggtgatgat 4699 Query: 625 gggtattctgatgttctggatccgtgtctgattcagaagcgtctctggtaggcgtttgaa 684 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4698 gggtattctgatgttctggatccgtgtctgattcagaagcgtctctggtaggcgtttgaa 4639 Query: 685 ctcctgtactatttccagtggtgtttgttgagtttgattcttgacaccagtacctatgaa 744 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4638 ctcctgtactatttccagtggtgtttgttgagtttgattcttgacaccagtacctatgaa 4579 Query: 745 attcccatgatttcagttggcacagtcttgagcaatatttggtgcgcttacaccttctac 804 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4578 attcccatgatttcagttggcacagtcttgagcaatatttggtgcgcttacaccttctac 4519 Query: 805 atttggggaactgttttggatgatctttccatttcccacagctgaaattagcacactgcc 864 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 4518 atttggggaactgttttggatgatcttcccatttcccacagctgaaattagcacactgcc 4459 Query: 865 tgactcctgtagcctcatgtttnctgcacgaattttctctttaccacggagcttcagtag 924 |||||||||||||||||||||| ||||||| | |||||| ||||||||||||| |||||| Sbjct: 4458 tgactcctgtagcctcatgtttcctgcacg-agtttctcattaccacggagctccagtag 4400 Query: 925 ttgcacgaatttcgttttaaggagccctt 953 |||||| |||||| |||||||||||||| Sbjct: 4399 -tgcacg-atttcg-tttaaggagccctt 4374 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7032 Number of Sequences: 1807 Number of extensions: 7032 Number of successful extensions: 111 Number of sequences better than 1.0e-20: 1 length of query: 985 length of database: 10,358,551 effective HSP length: 16 effective length of query: 969 effective length of database: 10,329,639 effective search space: 10009420191 effective search space used: 10009420191 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)