BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC16ZC10FM1.SCF screened BAC_end (955 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1442 1580 0.0 >3x_Contig1442 Length = 8270 Score = 1580 bits (797), Expect = 0.0 Identities = 848/861 (98%), Gaps = 3/861 (0%) Strand = Plus / Minus Query: 87 taacaaacgatcgtctccagatcaattgagctataactctttcaccactatgaagaaaaa 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5238 taacaaacgatcgtctccagatcaattgagctataactctttcaccactatgaagaaaaa 5179 Query: 147 tcacataaaaaaaccgtgaacctgaacaggaactttcaaaagtgcgttcttagtgaaaag 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5178 tcacataaaaaaaccgtgaacctgaacaggaactttcaaaagtgcgttcttagtgaaaag 5119 Query: 207 aaaaaaacaccaaatgtatcttcactggctcctgaacaacaccttatatttcaaaacaat 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5118 aaaaaaacaccaaatgtatcttcactggctcctgaacaacaccttatatttcaaaacaat 5059 Query: 267 aaagtcatctcatgaccatctattcgtaaaccaactgctcttctcttacttttacgtatg 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5058 aaagtcatctcatgaccatctattcgtaaaccaactgctcttctcttacttttacgtatg 4999 Query: 327 ttgagcctttccgatttctcaacatcccaacaaattcgcaaaaaccatgcgatgctgaag 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4998 ttgagcctttccgatttctcaacatcccaacaaattcgcaaaaaccatgcgatgctgaag 4939 Query: 387 agggaaatggtgttacccgaccattacgttatcatgagtagacacgtgaccgtaaagatc 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4938 agggaaatggtgttacccgaccattacgttatcatgagtagacacgtgaccgtaaagatc 4879 Query: 447 tttaggtgtcctcgctaaggtgatgatcggtatcacctggtgttcggtaccgctcagtgg 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4878 tttaggtgtcctcgctaaggtgatgatcggtatcacctggtgttcggtaccgctcagtgg 4819 Query: 507 ttgtatttggtgttgggatgatcgtatctccaaagcctgttgtggaaggagtagttggag 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4818 ttgtatttggtgttgggatgatcgtatctccaaagcctgttgtggaaggagtagttggag 4759 Query: 567 ggattgttgtagcttctgttgggttttgttgttgcggttgatgatgatggtggtgatgat 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4758 ggattgttgtagcttctgttgggttttgttgttgcggttgatgatgatggtggtgatgat 4699 Query: 627 gggtattctgatgttctggatccgtgtctgattcagaagcgtctctggtaggcgtttgaa 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4698 gggtattctgatgttctggatccgtgtctgattcagaagcgtctctggtaggcgtttgaa 4639 Query: 687 ctcctgtactatttccagtggtgtttgttgagtttgattcttgacaccagtacctatgaa 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4638 ctcctgtactatttccagtggtgtttgttgagtttgattcttgacaccagtacctatgaa 4579 Query: 747 attcccatgatttcagttggcacagtcttgagcaatatttggtgcgcttacaccttctac 806 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4578 attcccatgatttcagttggcacagtcttgagcaatatttggtgcgcttacaccttctac 4519 Query: 807 atttggggaactgttttggatgatccttccattttccacagctgaaaatagcacactgcc 866 ||||||||||||||||||||||||| | |||||| |||||||||||| |||||||||||| Sbjct: 4518 atttggggaactgttttggatgatcttcccatttcccacagctgaaattagcacactgcc 4459 Query: 867 tgacttcctgta-cctcatgttttctgcacgagtttttcattaccacggaacttcagtaa 925 |||| ||||||| |||||||||| |||||||||||| ||||||||||||| || ||||| Sbjct: 4458 tgac-tcctgtagcctcatgtttcctgcacgagtttctcattaccacggagctccagtag 4400 Query: 926 tgcccggatttcgtttaagga 946 ||| | ||||||||||||||| Sbjct: 4399 tgcac-gatttcgtttaagga 4380 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6957 Number of Sequences: 1807 Number of extensions: 6957 Number of successful extensions: 116 Number of sequences better than 1.0e-20: 1 length of query: 955 length of database: 10,358,551 effective HSP length: 16 effective length of query: 939 effective length of database: 10,329,639 effective search space: 9699531021 effective search space used: 9699531021 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)