BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC16ZD06FM1.SCF screened BAC_end (979 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1536 1402 0.0 >3x_Contig1536 Length = 11572 Score = 1402 bits (707), Expect = 0.0 Identities = 754/767 (98%), Gaps = 2/767 (0%) Strand = Plus / Plus Query: 90 gaatatgacttaactctcactcttatttgaatacacttagacaatacattagaaacatct 149 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6246 gaatatgacttaactctcactcttatttgaatacacttagacaatacattagaaacatct 6305 Query: 150 gctgtaaaccgtatgtatgatatatgtacttgcattaaagacttttttcaaggctgatat 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6306 gctgtaaaccgtatgtatgatatatgtacttgcattaaagacttttttcaaggctgatat 6365 Query: 210 aaatttgaattttgttgcatccagacaaaagacagaagtaccaaccaacccacatacaac 269 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6366 aaatttgaaaaaggaagcatccagacaaaagacagaagtaccaaccaacccacatacaac 6425 Query: 270 aagaaagaaagtaacgaacataccttcttgtgttggaacgatcctattcactctgtaacg 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6426 aagaaagaaagtaacgaacataccttcttgtgttggaacgatcctattcactctgtaacg 6485 Query: 330 gattgcttgaccactggttattgcattgatgtacaattgttccatgaaataaggtcataa 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6486 gattgcttgaccactggttattgcattgatgtacaattgttccatgaaataaggtcataa 6545 Query: 390 tttcgtttgttttagttacgtttgagaacgcatacgaaggagatgtcaactgaggccacg 449 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6546 tttcgtttgttttagttacgtttgagaacgcatacgaaggagatgtcaactgaggccacg 6605 Query: 450 agctctgatgcatcggtgttctccaatatgcattcggtggatagcacaagggataataca 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6606 agctctgatgcatcggtgttctccaatatgcattcggtggatagcacaagggataataca 6665 Query: 510 agggataatacaagggataatacacccatgaatgaaggtgacactcaaggtaagcgtatg 569 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6666 agggataatacaagggataatacacccatgaatgaaggtgacactcaaggtaagcgtatg 6725 Query: 570 acgaagagtactatggctttaattgaagagtctatgaagtatgatatgcgcagtgagtat 629 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6726 acgaagagtactatggctttaattgaagagtctatgaagtatgatatgcgcagtgagtat 6785 Query: 630 tttcttcccatgacatttctaagagaacgtcggaaacctgcaagagttgagagcgacgag 689 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6786 tttcttcccatgacatttctaagagaacgtcggaaacctgcaagagttgagagcgacgag 6845 Query: 690 gaagataaactagcggaagtaaaatcgaaaaggctcgtttcgaagaaggaccaggtcaag 749 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 6846 gaagataaactagcggaagtaaaatcgaaaaggcgcgtttcgaagaaggaccaggtcaag 6905 Query: 750 gcggatattcattcgacgaaaattaagaaaactggccgccctttcaatgtc-aagcttga 808 ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| || Sbjct: 6906 gcggatattcattcgacgaaaattaagaaaactggccgcccttccaatgtcaaagctgga 6965 Query: 809 gcgaagaacacttccaaa-ttaccaagcagtagtcgaccaaatcgca 854 |||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 6966 gcgaagaacacttccaaagttaccaagcagaggtcgaccaaatcgca 7012 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6514 Number of Sequences: 1807 Number of extensions: 6514 Number of successful extensions: 52 Number of sequences better than 1.0e-20: 1 length of query: 979 length of database: 10,358,551 effective HSP length: 16 effective length of query: 963 effective length of database: 10,329,639 effective search space: 9947442357 effective search space used: 9947442357 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)