BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC16ZD06FM1.SCF screened BAC_end
         (979 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1536                                                        1402   0.0  

>3x_Contig1536 
          Length = 11572

 Score = 1402 bits (707), Expect = 0.0
 Identities = 754/767 (98%), Gaps = 2/767 (0%)
 Strand = Plus / Plus

                                                                        
Query: 90   gaatatgacttaactctcactcttatttgaatacacttagacaatacattagaaacatct 149
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6246 gaatatgacttaactctcactcttatttgaatacacttagacaatacattagaaacatct 6305

                                                                        
Query: 150  gctgtaaaccgtatgtatgatatatgtacttgcattaaagacttttttcaaggctgatat 209
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6306 gctgtaaaccgtatgtatgatatatgtacttgcattaaagacttttttcaaggctgatat 6365

                                                                        
Query: 210  aaatttgaattttgttgcatccagacaaaagacagaagtaccaaccaacccacatacaac 269
            |||||||||    |  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6366 aaatttgaaaaaggaagcatccagacaaaagacagaagtaccaaccaacccacatacaac 6425

                                                                        
Query: 270  aagaaagaaagtaacgaacataccttcttgtgttggaacgatcctattcactctgtaacg 329
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6426 aagaaagaaagtaacgaacataccttcttgtgttggaacgatcctattcactctgtaacg 6485

                                                                        
Query: 330  gattgcttgaccactggttattgcattgatgtacaattgttccatgaaataaggtcataa 389
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6486 gattgcttgaccactggttattgcattgatgtacaattgttccatgaaataaggtcataa 6545

                                                                        
Query: 390  tttcgtttgttttagttacgtttgagaacgcatacgaaggagatgtcaactgaggccacg 449
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6546 tttcgtttgttttagttacgtttgagaacgcatacgaaggagatgtcaactgaggccacg 6605

                                                                        
Query: 450  agctctgatgcatcggtgttctccaatatgcattcggtggatagcacaagggataataca 509
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6606 agctctgatgcatcggtgttctccaatatgcattcggtggatagcacaagggataataca 6665

                                                                        
Query: 510  agggataatacaagggataatacacccatgaatgaaggtgacactcaaggtaagcgtatg 569
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6666 agggataatacaagggataatacacccatgaatgaaggtgacactcaaggtaagcgtatg 6725

                                                                        
Query: 570  acgaagagtactatggctttaattgaagagtctatgaagtatgatatgcgcagtgagtat 629
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6726 acgaagagtactatggctttaattgaagagtctatgaagtatgatatgcgcagtgagtat 6785

                                                                        
Query: 630  tttcttcccatgacatttctaagagaacgtcggaaacctgcaagagttgagagcgacgag 689
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6786 tttcttcccatgacatttctaagagaacgtcggaaacctgcaagagttgagagcgacgag 6845

                                                                        
Query: 690  gaagataaactagcggaagtaaaatcgaaaaggctcgtttcgaagaaggaccaggtcaag 749
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 6846 gaagataaactagcggaagtaaaatcgaaaaggcgcgtttcgaagaaggaccaggtcaag 6905

                                                                        
Query: 750  gcggatattcattcgacgaaaattaagaaaactggccgccctttcaatgtc-aagcttga 808
            ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||
Sbjct: 6906 gcggatattcattcgacgaaaattaagaaaactggccgcccttccaatgtcaaagctgga 6965

                                                           
Query: 809  gcgaagaacacttccaaa-ttaccaagcagtagtcgaccaaatcgca 854
            |||||||||||||||||| |||||||||||  |||||||||||||||
Sbjct: 6966 gcgaagaacacttccaaagttaccaagcagaggtcgaccaaatcgca 7012


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6514
Number of Sequences: 1807
Number of extensions: 6514
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 979
length of database: 10,358,551
effective HSP length: 16
effective length of query: 963
effective length of database: 10,329,639
effective search space: 9947442357
effective search space used: 9947442357
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)