BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC16ZD07FM1.SCF screened BAC_end (955 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1288 1576 0.0 >3x_Contig1288 Length = 8015 Score = 1576 bits (795), Expect = 0.0 Identities = 847/860 (98%), Gaps = 4/860 (0%) Strand = Plus / Plus Query: 86 tttcaccaggtctgcttgacatcaacggtaaagaaatcaaaaagtcaatgaccccaactg 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2427 tttcaccaggtctgcttgacatcaacggtaaagaaatcaaaaagtcaatgaccccaactg 2486 Query: 146 atttacgtcgcttagaagaagagaatatgaggcaaagattaaatgttgatttggccccat 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2487 atttacgtcgcttagaagaagagaatatgaggcaaagattaaatgttgatttggccccat 2546 Query: 206 tctacgagaaagttttgaaatgggactacaaaagaaccagtgagtacccaaccgatacag 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2547 tctacgagaaagttttgaaatgggactacaaaagaaccagtgagtacccaaccgatacag 2606 Query: 266 aaacatcctactctgacgtgaaggactcattttcatcggtctctgattatcaaaaagtca 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2607 aaacatcctactctgacgtgaaggactcattttcatcggtctctgattatcaaaaagtca 2666 Query: 326 tggaaccgcttttgctgctagaatgttggcagggattgtgctcagctcgagacagggaag 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2667 tggaaccgcttttgctgctagaatgttggcagggattgtgctcagctcgagacagggaag 2726 Query: 386 aacagaaaagctttagtttcattgtaggaaataggacggttgtttctgacttttacgagg 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2727 aacagaaaagctttagtttcattgtaggaaataggacggttgtttctgacttttacgagg 2786 Query: 446 tatatgcatcaatcaacaaaaatgttgttcgtgacacaggtatcaatgactcggatttaa 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2787 tatatgcatcaatcaacaaaaatgttgttcgtgacacaggtatcaatgactcggatttaa 2846 Query: 506 ttgttcttggctatttccccgactcttcttcttcaaagccattgacagataaagaattca 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2847 ttgttcttggctatttccccgactcttcttcttcaaagccattgacagataaagaattca 2906 Query: 566 aacgatcaaatcacacttgtttagccaaaattaaagagataaagaactcgaaaggtgaaa 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2907 aacgatcaaatcacacttgtttagccaaaattaaagagataaagaactcgaaaggtgaaa 2966 Query: 626 atatggaccttacattcaggattcatcgcagtcataaattctcaaatcttntaactttac 685 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2967 atatggaccttacattcaggattcatcgcagtcataaattctcaaatcttttaactttac 3026 Query: 686 gttctgaaattcatgctttgaaagtcatgcaaatgaccacagtcgaaagagaatacacat 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3027 gttctgaaattcatgctttgaaagtcatgcaaatgaccacagtcgaaagagaatacacat 3086 Query: 746 ctttaaaaggtttgccctattatgatctcttaaaacaaatactcaaagctcaaccatccg 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3087 ctttaaaaggtttgccctattatgatctcttaaaacaaatactcaaagctcaaccatccg 3146 Query: 806 tttcagagaatattagtagcactgaagtttatagaatcaaagcaaactttca-ctanata 864 || |||||||||||||||||||||||||| ||||||||||||||||||| || ||| ||| Sbjct: 3147 ttccagagaatattagtagcactgaagttaatagaatcaaagcaaacttccacctaaata 3206 Query: 865 catnccaggc-acagcatttttgagtaccgtaactacccaa-gtttttcactaattc-ag 921 ||| |||||| |||||| |||||||||| |||||||||||| ||||||||||||||| || Sbjct: 3207 catcccaggcaacagcaattttgagtacggtaactacccaaggtttttcactaattcaag 3266 Query: 922 gccctcccggtactgttaaa 941 ||||||||||||||| |||| Sbjct: 3267 gccctcccggtactggtaaa 3286 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7670 Number of Sequences: 1807 Number of extensions: 7670 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 955 length of database: 10,358,551 effective HSP length: 16 effective length of query: 939 effective length of database: 10,329,639 effective search space: 9699531021 effective search space used: 9699531021 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)