BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC16ZD10FM1.SCF screened BAC_end (974 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1665 1374 0.0 >3x_Contig1665 Length = 15710 Score = 1374 bits (693), Expect = 0.0 Identities = 783/802 (97%), Gaps = 10/802 (1%) Strand = Plus / Minus Query: 86 ccatctgtggaacacgaaattgatgcataatgttgattatgaaattatgaagaagggtgt 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8688 ccatctgtggaacacgaaattgatgcataatgttgattatgaaattatgaagaagggtgt 8629 Query: 146 atttagcgatgatgttatagaggatgaattggactttcaggacgtcttagatgagaatga 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8628 atttagcgatgatgttatagaggatgaattggactttcaggacgtcttagatgagaatga 8569 Query: 206 ccttctggacgttttataggttgatgatttggatcaagatatggaacttgccatggatat 265 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8568 ccttctggacgttttaaaggttgatgatttggatcaagatatggaacttgccatggatat 8509 Query: 266 tagtaatgaggatgcgttgagcgtacatgaggaaggg-gatattatgggagaagaggagg 324 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 8508 tagtaatgaggatgcgttgagcgtagatgaggaagggagatattatgggagaagaggagg 8449 Query: 325 aagcagcactcatagaagatcctgaaatattcgacaccatcggtgccgtatatggacttg 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8448 aagcagcactcatagaagatcctgaaatattcgacaccatcggtgccgtatatggacttg 8389 Query: 385 ataccgtttcgttatcttcaaatgcctccgtatcttcttcctcatcttctacttcgtcat 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8388 ataccgtttcgttatcttcaaatgcctccgtatcttcttcctcatcttctacttcgtcat 8329 Query: 445 cgatttcagaaacaccttcgatatcatctctgtattctgttgaaaagggtatggatgaaa 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8328 cgatttcagaaacaccttcgatatcatctctgtattctgttgaaaagggtatggatgaaa 8269 Query: 505 acctagcctcgttgaacgagtttcatatttacaatggtttcgattctactccatcattcc 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8268 acctagcctcgttgaacgagtttcatatttacaatggtttcgattctactccatcattcc 8209 Query: 565 ctcgtgaatatagtacgccgaacgaatcatctgcatcattgactcaagatcaagatggct 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8208 ctcgtgaatatagtacgccgaacgaatcatctgcatcattgactcaagatcaagatggct 8149 Query: 625 tcagggatgaagatgataaacagttactaagtagaagaaggaaactaataccaagaagaa 684 |||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||| Sbjct: 8148 tcagggatgaagatgataaaaagttactaagtagaagaaggaaacgaataccaaaaagaa 8089 Query: 685 aaagatctatccatagttttgaagtatcaaagagagaacattcattgngtgtagtagtta 744 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 8088 aaagatctatccatagttttgaagtatcaaagagagaacattcattgggtgtagtagtta 8029 Query: 745 tgaccttgaagagtattacaaaccttccattggttaagcaagaaaatgtcanaaacaggc 804 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 8028 tgaccttgaagagtattacaaaccttccattggttaag-aagaaaatgtcaaaaacaggc 7970 Query: 805 tatngataatgggatccgatcgtttataattacatttgggtaggaagagtgtttaaaaag 864 ||| |||| ||||||| ||| |||||||||||||| |||||| ||||||||| ||||| Sbjct: 7969 tat-gata--tggatccgttcg-ttataattacattt-ggtagg-agagtgttt-aaaag 7917 Query: 865 ctcttacaagaagacatacttt 886 |||||||||| ||||||||||| Sbjct: 7916 ctcttacaag-agacatacttt 7896 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7672 Number of Sequences: 1807 Number of extensions: 7672 Number of successful extensions: 76 Number of sequences better than 1.0e-20: 1 length of query: 974 length of database: 10,358,551 effective HSP length: 16 effective length of query: 958 effective length of database: 10,329,639 effective search space: 9895794162 effective search space used: 9895794162 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)