BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC16ZD10FM1.SCF screened BAC_end
         (974 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1665                                                        1374   0.0  

>3x_Contig1665 
          Length = 15710

 Score = 1374 bits (693), Expect = 0.0
 Identities = 783/802 (97%), Gaps = 10/802 (1%)
 Strand = Plus / Minus

                                                                        
Query: 86   ccatctgtggaacacgaaattgatgcataatgttgattatgaaattatgaagaagggtgt 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8688 ccatctgtggaacacgaaattgatgcataatgttgattatgaaattatgaagaagggtgt 8629

                                                                        
Query: 146  atttagcgatgatgttatagaggatgaattggactttcaggacgtcttagatgagaatga 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8628 atttagcgatgatgttatagaggatgaattggactttcaggacgtcttagatgagaatga 8569

                                                                        
Query: 206  ccttctggacgttttataggttgatgatttggatcaagatatggaacttgccatggatat 265
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8568 ccttctggacgttttaaaggttgatgatttggatcaagatatggaacttgccatggatat 8509

                                                                        
Query: 266  tagtaatgaggatgcgttgagcgtacatgaggaaggg-gatattatgggagaagaggagg 324
            ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 8508 tagtaatgaggatgcgttgagcgtagatgaggaagggagatattatgggagaagaggagg 8449

                                                                        
Query: 325  aagcagcactcatagaagatcctgaaatattcgacaccatcggtgccgtatatggacttg 384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8448 aagcagcactcatagaagatcctgaaatattcgacaccatcggtgccgtatatggacttg 8389

                                                                        
Query: 385  ataccgtttcgttatcttcaaatgcctccgtatcttcttcctcatcttctacttcgtcat 444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8388 ataccgtttcgttatcttcaaatgcctccgtatcttcttcctcatcttctacttcgtcat 8329

                                                                        
Query: 445  cgatttcagaaacaccttcgatatcatctctgtattctgttgaaaagggtatggatgaaa 504
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8328 cgatttcagaaacaccttcgatatcatctctgtattctgttgaaaagggtatggatgaaa 8269

                                                                        
Query: 505  acctagcctcgttgaacgagtttcatatttacaatggtttcgattctactccatcattcc 564
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8268 acctagcctcgttgaacgagtttcatatttacaatggtttcgattctactccatcattcc 8209

                                                                        
Query: 565  ctcgtgaatatagtacgccgaacgaatcatctgcatcattgactcaagatcaagatggct 624
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8208 ctcgtgaatatagtacgccgaacgaatcatctgcatcattgactcaagatcaagatggct 8149

                                                                        
Query: 625  tcagggatgaagatgataaacagttactaagtagaagaaggaaactaataccaagaagaa 684
            |||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||
Sbjct: 8148 tcagggatgaagatgataaaaagttactaagtagaagaaggaaacgaataccaaaaagaa 8089

                                                                        
Query: 685  aaagatctatccatagttttgaagtatcaaagagagaacattcattgngtgtagtagtta 744
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 8088 aaagatctatccatagttttgaagtatcaaagagagaacattcattgggtgtagtagtta 8029

                                                                        
Query: 745  tgaccttgaagagtattacaaaccttccattggttaagcaagaaaatgtcanaaacaggc 804
            |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 8028 tgaccttgaagagtattacaaaccttccattggttaag-aagaaaatgtcaaaaacaggc 7970

                                                                        
Query: 805  tatngataatgggatccgatcgtttataattacatttgggtaggaagagtgtttaaaaag 864
            ||| ||||   ||||||| ||| |||||||||||||| |||||| ||||||||| |||||
Sbjct: 7969 tat-gata--tggatccgttcg-ttataattacattt-ggtagg-agagtgttt-aaaag 7917

                                  
Query: 865  ctcttacaagaagacatacttt 886
            |||||||||| |||||||||||
Sbjct: 7916 ctcttacaag-agacatacttt 7896


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7672
Number of Sequences: 1807
Number of extensions: 7672
Number of successful extensions: 76
Number of sequences better than 1.0e-20: 1
length of query: 974
length of database: 10,358,551
effective HSP length: 16
effective length of query: 958
effective length of database: 10,329,639
effective search space: 9895794162
effective search space used: 9895794162
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)