BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC16ZE06RM1.SCF screened BAC_end (948 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1640 1518 0.0 >3x_Contig1640 Length = 15521 Score = 1518 bits (766), Expect = 0.0 Identities = 852/875 (97%), Gaps = 5/875 (0%) Strand = Plus / Plus Query: 43 cttttgtcaattcgacgttcta-gtactaggtccaacgtttcctatctacttgaaggtag 101 |||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||| Sbjct: 11342 cttttgtcaattcgacgttctatgaactaggtccaacgtttcctatctagttgaaggtag 11401 Query: 102 ccctacgtttgaagtcgttattgttttcttgctaaatactatgatcctccctattattgt 161 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11402 ccctacgtttgaagtcgttattgttttcttgctaaatactatgatcctccctattattgt 11461 Query: 162 tatttttattgtaacaatcgcactttctttattttcaacactaattcaaggttaatatac 221 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 11462 tatttttattgtaacaatcgcactttctttattttcaacactaattcaaggttaaaagac 11521 Query: 222 aaacgttctagacgcatataactgcattcagttcaggcattgatctcgagcgttaacaaa 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11522 aaacgttctagacgcatataactgcattcagttcaggcattgatctcgagcgttaacaaa 11581 Query: 282 ctagttggacaatttcagatgctcataaattgctgaagatccaggaatgttcagcacctc 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11582 ctagttggacaatttcagatgctcataaattgctgaagatccaggaatgttcagcacctc 11641 Query: 342 gaaaggtagtatgtcagttcaaccaatatcgtaaaatagtgactgaagttttcttcacgt 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11642 gaaaggtagtatgtcagttcaaccaatatcgtaaaatagtgactgaagttttcttcacgt 11701 Query: 402 gacccagatctgtgaacggaggtttcaatattaattataacaaagacgatcctgggttgg 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11702 gacccagatctgtgaacggaggtttcaatattaattataacaaagacgatcctgggttgg 11761 Query: 462 cagagaaaaactcggatcccttcactgcaaagtttatacacaaaaccatattccctcatt 521 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11762 cagagaaaaactcggatcccttcactgcaaagtttatacacaaaaccatattccctcatt 11821 Query: 522 tgtcccaaacttcgtttcacgatggacaggccatggatactattcatagctgaacctgaa 581 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11822 tgtcccaaacttcgtttcacgatggacaggccatggatactattcatagctgaacctgaa 11881 Query: 582 tacagtttacaggaatataagcttttgcaaaaagagttcaacacggttaattacacactt 641 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11882 tacagtttacaggaatataagcttttgcaaaaagagttcaacacggttaattacacactt 11941 Query: 642 gaacgagatgttgatggcactggtaaggaagcatttctaactttcttggaccagcattcg 701 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11942 gaacgagatgttgatggcactggtaaggaagcatttctaactttcttggaccagcattcg 12001 Query: 702 aagcanaagggtccaattgttcgaatatttggagggtatccacaattcgctcccttaggt 761 ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 12002 aagcaaaagggtccaattgtcggaatatttggagggtatccacaattcgctcccttaggt 12061 Query: 762 ggtttgagtgcagaaatcttggatgatcatcgtttgccctgngtcgatcaagtgcatatg 821 |||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||| Sbjct: 12062 ggtttgagtgcagaaatcttggatgatcatcg-ttggcctgggtcgatcaagtgcatatg 12120 Query: 822 tctgtgtttctgtaagttacaatttgcctcgacctgaattccttacgggaaaaaggcatt 881 |||||| ||||||| ||||||| ||| ||||||||||| || |||||||||| |||||| Sbjct: 12121 tctgtg-ttctgtaggttacaa-ttggctcgacctgaagtcactacgggaaaagggcatt 12178 Query: 882 ctactgttccaattatgacgacatgatacangact 916 | |||| | ||||||||||||||||||||| |||| Sbjct: 12179 caactg-tacaattatgacgacatgatacaggact 12212 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6344 Number of Sequences: 1807 Number of extensions: 6344 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 948 length of database: 10,358,551 effective HSP length: 16 effective length of query: 932 effective length of database: 10,329,639 effective search space: 9627223548 effective search space used: 9627223548 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)