BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC16ZF02RM1.SCF screened BAC_end (937 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig589 1380 0.0 >3x_Contig589 Length = 2261 Score = 1380 bits (696), Expect = 0.0 Identities = 802/825 (97%), Gaps = 11/825 (1%) Strand = Plus / Minus Query: 105 tcatctgctggttcaccgtcatctgtgaagtcggcttcttcatcactatcttcaatgaat 164 |||||||||||| ||||||||||||| ||||||||| ||||||||||||||| ||||| Sbjct: 2260 tcatctgctggt-caccgtcatctgt-aagtcggctc--tcatcactatcttca-tgaat 2206 Query: 165 tcttttgaaagtggtctggacttacctctcttagagtcaccattttgaactccgttttat 224 ||||| |||||||||||||||| |||||||||||| |||||||||||| ||||||| || Sbjct: 2205 tcttt-gaaagtggtctggact-acctctcttaga-tcaccattttga-ctccgttcaat 2150 Query: 225 tgatcatcatcctcatcatcttcatcaacgatttttttggcagttcttctctttttcttt 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2149 tgatcatcatcctcatcatcttcatcaacgatttttttggcagttcttctctttttcttt 2090 Query: 285 gaagatttactatcagagtctgcttttctctttgctttcttccctttcttagatggtgct 344 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 2089 gaagatttactatcagagtctgcttttctctttgctttcttccctgtcttagatggtgct 2030 Query: 345 ttataagacccgtcttcttcttgaggtaggtcatcgttgtcattgtcgtcatcaacaatc 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2029 ttataagacccgtcttcttcttgaggtaggtcatcgttgtcattgtcgtcatcaacaatc 1970 Query: 405 tcctcttgcgcggtacgttcttggatcaacctttgtgcttcttcttgcaattttctgtat 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1969 tcctcttgcgcggtacgttcttggatcaacctttgtgcttcttcttgcaattttctgtat 1910 Query: 465 tcctccgccagtttttcacttttgatcttttcttcttccttctgttgggcgtccctttga 524 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1909 tcctccgccagtttttcactgttgatcttttcttcttccttctgttgggcgtccctttga 1850 Query: 525 gcttcaagctcacgttgttcttccaaaactttacgagcattttccattttggctgagatt 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1849 gcttcaagctcacgttgttcttccaaaactttacgagcattttccattttggctgagatt 1790 Query: 585 tccaattcatacgccttttggtcttctatactgcgctctagtgctgttntcatggtggtc 644 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1789 tccaattcatacgccttttggtcttctatactgcgctctagtgctgttttcatggtggtc 1730 Query: 645 tcacctagttgaatacgttgctctaattgttctgaaggaattactatggatttagtttcc 704 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1729 tcacctagttgaatacgttgctctaattgttctgaaggaattactatggatttagtttcc 1670 Query: 705 agaagttcttttaataatgaaataccgtattgcaacccctcaatactggcttcaagatca 764 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1669 agaagttcttttaataatgaaataccgtattgcaacccctcaatactggcttcaagatca 1610 Query: 765 gccatggttctttctttangactagatcttctcatttgctcggcaactttggattccaat 824 |||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||| Sbjct: 1609 gccatggttctttctttaggactagatcttctcatttgctcggcaacttggaattccaat 1550 Query: 825 aatgcaaagttgaacttatagctactggtcatctttaccgtttacttttcgcagattcta 884 ||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 1549 aatgcaaggttgaacttatagctactggtcatc-ttaccgtttac-tttcgcagattcta 1492 Query: 885 aatcatacgcacgtttgacattaccaagcgctttctgtacagctt 929 ||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 1491 aatcatacgcacgtttgacataaccaagcgctttctgaacagctt 1447 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9776 Number of Sequences: 1807 Number of extensions: 9776 Number of successful extensions: 119 Number of sequences better than 1.0e-20: 1 length of query: 937 length of database: 10,358,551 effective HSP length: 16 effective length of query: 921 effective length of database: 10,329,639 effective search space: 9513597519 effective search space used: 9513597519 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)