BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC16ZF12FM1.SCF screened BAC_end (974 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1394 1132 0.0 >3x_Contig1394 Length = 5721 Score = 1132 bits (571), Expect = 0.0 Identities = 601/611 (98%) Strand = Plus / Plus Query: 88 ggaagattcagtagaggattgagaagaagaagaagaagaagaagaggaagattcttcttc 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1223 ggaagattcagtagaggattgagaagaagaagaagaagaagaagaggaagattcttcttc 1282 Query: 148 agaacttgaggttgaaggttccaaagtagtggtttgttgatcctcagtggacgaagtagt 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1283 agaacttgaggttgaaggttccaaagtagtggtttgttgatcctcagtggacgaagtagt 1342 Query: 208 agctgctttttttttggaagtgacagtagctggagcaatggtttcaccctggccgttgac 267 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1343 agctgcttcttcggtggaagtgacagtagctggagcaatggtttcaccctggccgttgac 1402 Query: 268 ggtaacggtttggtaaacatactcgacagcaacagctctcttgtgcttgtgatgagcatg 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1403 ggtaacggtttggtaaacatactcgacagcaacagctctcttgtgcttgtgatgagcatg 1462 Query: 328 gacggtagttgagcagtcctcatcacgcttagcatgagcatgaggcaaagcagataccat 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1463 gacggtagttgagcagtcctcatcacgcttagcatgagcatgaggcaaagcagataccat 1522 Query: 388 agctgcgctaataaaagaagcggaagctaaagcagtagtgaatctcatctttaaattagg 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1523 agctgcgctaataaaagaagcggaagctaaagcagtagtgaatctcatctttaaattagg 1582 Query: 448 cttttaaaaattaacaaaggagtgtattgagtttctgtattgaaaggaaaatgattaatt 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1583 cttttaaaaattaacaaaggagtgtattgagtttctgtattgaaaggaaaatgattaatt 1642 Query: 508 gttattattagagaacgatgtcttttgaggttaggggggatgggatgagtggggaatata 567 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1643 gttagtattagagaacgatgtcttttgaggttaggggggatgggatgagtggggaataga 1702 Query: 568 cacaattccaatcgaattcgaatctgtgatcgatacactggaaaagaacgtacaattgaa 627 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1703 cacaattccaatcgaattcgaatctgtgattgatacactggaaaagaacgtacaattgaa 1762 Query: 628 ggaaacagtgaaagtattctgcttttcctttaataactgaatatcaaggtctctggtgct 687 ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 1763 ggaaacagtgaaagtattctgcttttcctttaataactgaatatcaatgtcgctggtgct 1822 Query: 688 ttcaaaaaatg 698 || |||||||| Sbjct: 1823 ttgaaaaaatg 1833 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 11,350 Number of Sequences: 1807 Number of extensions: 11350 Number of successful extensions: 687 Number of sequences better than 1.0e-20: 1 length of query: 974 length of database: 10,358,551 effective HSP length: 16 effective length of query: 958 effective length of database: 10,329,639 effective search space: 9895794162 effective search space used: 9895794162 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)