BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC16ZG01RM1.SCF screened BAC_end
         (908 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1648                                                        1479   0.0  

>3x_Contig1648 
          Length = 16375

 Score = 1479 bits (746), Expect = 0.0
 Identities = 807/822 (98%), Gaps = 4/822 (0%)
 Strand = Plus / Plus

                                                                         
Query: 47    cacccttctcgttgacatctgcgacacctttagggaaacatttcacaaatttcttggcat 106
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12029 cacccttctcgttgacatctgcgacacctttagggaaacatttcacaaatttcttggcat 12088

                                                                         
Query: 107   catcaccggtgataggctgtgtgatctggatgtgtggtaatagtctataactagctgtcg 166
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12089 catcaccggtgataggctgtgtgatctggatgtgtggtaatagtctataactagctgtcg 12148

                                                                         
Query: 167   acaccggagagaacttggcatggtctgcaccgatacctagaatacaatgtgcccttaacg 226
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12149 acaccggagagaacttggcatggtctgcaccgatacctagaatacaatgtgcccttaacg 12208

                                                                         
Query: 227   aaatctcttgacctggtctcaacttggccaacattatatctggatccgctgccaccacgg 286
             |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||
Sbjct: 12209 aaatctcttgacctggtctcaacttggccaacaagatatctggatccgctgccaccacgg 12268

                                                                         
Query: 287   gacacttggcaaattgttccacctgtttcccctgaggctcaaacttaaggtccctagcat 346
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12269 gacacttggcaaattgttccacctgtttcccctgaggctcaaacttaaggtccctagcat 12328

                                                                         
Query: 347   agatatgcgcgtttctataaagaaccttggggtcttcacaatcctttggagcatctgggt 406
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12329 agatatgcgcgtttctataaagaaccttggggtcttcacaatcctttggagcatctgggt 12388

                                                                         
Query: 407   tcctggtacatttcacgttcaacgacatcactatcgtattttcatctgtaaacctttcag 466
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12389 tcctggtacatttcacgttcaacgacatcactatcgtattttcatctgtaaacctttcag 12448

                                                                         
Query: 467   attcgggcaatgacgtgtccacccaactcaacatatctggatccaccttcaatggcacta 526
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12449 attcgggcaatgacgtgtccacccaactcaacatatctggatccaccttcaatggcacta 12508

                                                                         
Query: 527   acccgattctatgcgccaacacttcgtcctgtagcacagacgtattgttaaaaaagtaga 586
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12509 acccgattctatgcgccaacacttcgtcctgtagcacagacgtattgttaaaaaagtaga 12568

                                                                         
Query: 587   cgtattctggagcgacagatggtacttctgagatcataatacgacggaaagcgttagcaa 646
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 12569 cgtattctggagcgacagatggtacttctgagatcataatacgacggaaagcgtta-caa 12627

                                                                         
Query: 647   tcgatgtgtcgacatgaaccaaatcgaaattcacttcacgctcatccatactctcgattt 706
             |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 12628 tcgatgtgtcgacatgaaccaaatcgaaattcacttcacgctcatccaaactctcgattt 12687

                                                                         
Query: 707   gtacgtcaaaagtttcctttaacttttccaagt-ccatgaatggttttgat-cgaactaa 764
             ||||||||||||||||||| ||||| ||||||| |||||||| || ||||| ||||||||
Sbjct: 12688 gtacgtcaaaagtttccttgaacttctccaagtcccatgaattgtcttgatccgaactaa 12747

                                                                         
Query: 765   at-cagggaaatctgttgaacttgtgttcgtcacacggttatattcaacaccaacgatat 823
             || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12748 atccagggaaatctgttgaacttgtgttcgtcacacggttatattcaacaccaacgatat 12807

                                                       
Query: 824   tggacatccttttttaattgaattgctacctgtatgctacct 865
             |||||||||||||| ||||| |||||||| | ||||||||||
Sbjct: 12808 tggacatcctttttcaattgtattgctacgtttatgctacct 12849


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5244
Number of Sequences: 1807
Number of extensions: 5244
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 908
length of database: 10,358,551
effective HSP length: 16
effective length of query: 892
effective length of database: 10,329,639
effective search space: 9214037988
effective search space used: 9214037988
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)