BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC16ZG03RM1.SCF screened BAC_end (949 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig804 1556 0.0 >3x_Contig804 Length = 3085 Score = 1556 bits (785), Expect = 0.0 Identities = 879/900 (97%), Gaps = 8/900 (0%) Strand = Plus / Plus Query: 40 cttgaaagcgccttcgggaacgaatttgtcgtttagttggttgaagaagtcagcaccatc 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1179 cttgaaagcgccttcgggaacgaatttgtcgtttagttggttgaagaagtcagcaccatc 1238 Query: 100 ttcttctgactttttgatgatgtcttctttggcatcatctaatgataatgcatctttcaa 159 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1239 ttcttctgactttttgatgatgtcttctttggcatcatctaatgataatgcatctttcaa 1298 Query: 160 gtaaagtgcagttccatccatagatagattctctagtaaattccagtcatcttcgtttgt 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1299 gtaaagtgcagttccatccatagatagattctctagtaaattccagtcatcttcgtttgt 1358 Query: 220 tgcgttgatcttttgtgataatctcttattgatcaatttcacgaagtccttggatttcaa 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1359 tgcgttgatcttttgtgataatctcttattgatcaatttcacgaagtccttggatttcaa 1418 Query: 280 ggactcatcgaaaagctgattcttttccagtccagaaatacaaggttttactacactgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1419 ggactcatcgaaaagctgattcttttccagtccagaaatacaaggttttactacactgac 1478 Query: 340 acctttaccatcatcggatattctaaccagcttaccaccgaatgcccattgagcggcagg 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1479 acctttaccatcatcggatattctaaccagcttaccaccgaatgcccattgagcggcagg 1538 Query: 400 agatttgttgccgtaccattttggggcttggatcttgacagtgttaggtttgtcatcaac 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1539 agatttgttgccgtaccattttggggcttggatcttgacagtgttaggtttgtcatcaac 1598 Query: 460 tgagttggaggttacattgttccagaattcatcctcagaagcatgttgcttactctcatt 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1599 tgagttggaggttacattgttccagaattcatcctcagaagcatgttgcttactctcatt 1658 Query: 520 tgcctgagcatccaaggtattgctcaaattttgcaacgtttgaacgacgatcttactatc 579 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1659 tgcctgagcatccaaggtattgctcaaattttgcaacgtttgaacgacgatcttactatc 1718 Query: 580 aaaggatgcggatgcaaataaatctggagcttcaggagcaaatttggatttaaagaccca 639 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1719 aaaggatgcggatgcaaataaatctggagcttcaggagcaaatttggatttaaagaccca 1778 Query: 640 gttaccacgtggagcgaactgagttaagatggagccttcttgcggattccataacaccga 699 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1779 gttaccacgtggagcgaactgagttaagatggagccttcttgcggattccataacaccga 1838 Query: 700 agtgttatcacgaccactggataacaatagattttcatcttgtttgcaccaatccaacga 759 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1839 agtgttatcacgaccactggataacaatagattttcatcttgtttgcaccaatccaacga 1898 Query: 760 ttaaacaccctttgaatgttcttgtgatagcacttttcatgggtacatgatgcatttctt 819 | ||||||||||||||||| ||||||||||||| ||||| ||||||||| ||||||||| Sbjct: 1899 taaaacaccctttgaatgtccttgtgatagcac-tttcaatggtacatga-gcatttctt 1956 Query: 820 agatcccacgtttagacaagaagtttctgtattctganctagaagcgggttgcaataatg 879 |||||||||||| |||||| || ||||||| ||||| ||||| || ||||||||||||| Sbjct: 1957 agatcccacgttaggacaag-aggttctgta-tctgagctagaggc-ggttgcaataatg 2013 Query: 880 gtataagctggttgaatgccagtccaacaaccgtcaatgtggacctttataccactggta 939 ||| ||||||||| |||||||| ||||||||||||||| ||||||| |||||| ||||| Sbjct: 2014 gta-gagctggttggatgccagt-caacaaccgtcaatg-ggaccttaataccagtggta 2070 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6880 Number of Sequences: 1807 Number of extensions: 6880 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 949 length of database: 10,358,551 effective HSP length: 16 effective length of query: 933 effective length of database: 10,329,639 effective search space: 9637553187 effective search space used: 9637553187 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)