BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC16ZG03RM1.SCF screened BAC_end
         (949 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig804                                                         1556   0.0  

>3x_Contig804 
          Length = 3085

 Score = 1556 bits (785), Expect = 0.0
 Identities = 879/900 (97%), Gaps = 8/900 (0%)
 Strand = Plus / Plus

                                                                        
Query: 40   cttgaaagcgccttcgggaacgaatttgtcgtttagttggttgaagaagtcagcaccatc 99
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1179 cttgaaagcgccttcgggaacgaatttgtcgtttagttggttgaagaagtcagcaccatc 1238

                                                                        
Query: 100  ttcttctgactttttgatgatgtcttctttggcatcatctaatgataatgcatctttcaa 159
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1239 ttcttctgactttttgatgatgtcttctttggcatcatctaatgataatgcatctttcaa 1298

                                                                        
Query: 160  gtaaagtgcagttccatccatagatagattctctagtaaattccagtcatcttcgtttgt 219
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1299 gtaaagtgcagttccatccatagatagattctctagtaaattccagtcatcttcgtttgt 1358

                                                                        
Query: 220  tgcgttgatcttttgtgataatctcttattgatcaatttcacgaagtccttggatttcaa 279
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1359 tgcgttgatcttttgtgataatctcttattgatcaatttcacgaagtccttggatttcaa 1418

                                                                        
Query: 280  ggactcatcgaaaagctgattcttttccagtccagaaatacaaggttttactacactgac 339
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1419 ggactcatcgaaaagctgattcttttccagtccagaaatacaaggttttactacactgac 1478

                                                                        
Query: 340  acctttaccatcatcggatattctaaccagcttaccaccgaatgcccattgagcggcagg 399
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1479 acctttaccatcatcggatattctaaccagcttaccaccgaatgcccattgagcggcagg 1538

                                                                        
Query: 400  agatttgttgccgtaccattttggggcttggatcttgacagtgttaggtttgtcatcaac 459
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1539 agatttgttgccgtaccattttggggcttggatcttgacagtgttaggtttgtcatcaac 1598

                                                                        
Query: 460  tgagttggaggttacattgttccagaattcatcctcagaagcatgttgcttactctcatt 519
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1599 tgagttggaggttacattgttccagaattcatcctcagaagcatgttgcttactctcatt 1658

                                                                        
Query: 520  tgcctgagcatccaaggtattgctcaaattttgcaacgtttgaacgacgatcttactatc 579
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1659 tgcctgagcatccaaggtattgctcaaattttgcaacgtttgaacgacgatcttactatc 1718

                                                                        
Query: 580  aaaggatgcggatgcaaataaatctggagcttcaggagcaaatttggatttaaagaccca 639
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1719 aaaggatgcggatgcaaataaatctggagcttcaggagcaaatttggatttaaagaccca 1778

                                                                        
Query: 640  gttaccacgtggagcgaactgagttaagatggagccttcttgcggattccataacaccga 699
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1779 gttaccacgtggagcgaactgagttaagatggagccttcttgcggattccataacaccga 1838

                                                                        
Query: 700  agtgttatcacgaccactggataacaatagattttcatcttgtttgcaccaatccaacga 759
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1839 agtgttatcacgaccactggataacaatagattttcatcttgtttgcaccaatccaacga 1898

                                                                        
Query: 760  ttaaacaccctttgaatgttcttgtgatagcacttttcatgggtacatgatgcatttctt 819
            | ||||||||||||||||| ||||||||||||| |||||  ||||||||| |||||||||
Sbjct: 1899 taaaacaccctttgaatgtccttgtgatagcac-tttcaatggtacatga-gcatttctt 1956

                                                                        
Query: 820  agatcccacgtttagacaagaagtttctgtattctganctagaagcgggttgcaataatg 879
            ||||||||||||  |||||| || ||||||| ||||| ||||| || |||||||||||||
Sbjct: 1957 agatcccacgttaggacaag-aggttctgta-tctgagctagaggc-ggttgcaataatg 2013

                                                                        
Query: 880  gtataagctggttgaatgccagtccaacaaccgtcaatgtggacctttataccactggta 939
            |||  ||||||||| |||||||| ||||||||||||||| ||||||| |||||| |||||
Sbjct: 2014 gta-gagctggttggatgccagt-caacaaccgtcaatg-ggaccttaataccagtggta 2070


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6880
Number of Sequences: 1807
Number of extensions: 6880
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 949
length of database: 10,358,551
effective HSP length: 16
effective length of query: 933
effective length of database: 10,329,639
effective search space: 9637553187
effective search space used: 9637553187
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)