BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC16ZG04FM1.SCF screened BAC_end (959 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1770 1503 0.0 >3x_Contig1770 Length = 29267 Score = 1503 bits (758), Expect = 0.0 Identities = 850/873 (97%), Gaps = 6/873 (0%) Strand = Plus / Plus Query: 85 aaaccagccttccaaacaggtgtcactgatagtgaacggaacataatcatactgagtttc 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19129 aaaccagccttccaaacaggtgtcactgatagtgaacggaacataatcatactgagtttc 19188 Query: 145 cgagtcgcgttcctgtcttggtggtactatggtaatatgtccgacacactcttttgaagc 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19189 cgagtcgcgttcctgtcttggtggtactatggtaatatgtccgacacactcttttgaagc 19248 Query: 205 aatctttgacacttatttatagaaactgcgggaaccagtataactaccaagccggaacga 264 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19249 aatctttgacacttaagtatagaaactgcgggaaccagtataactaccaagccggaacga 19308 Query: 265 tgacagccaactctggattgactatctatgtgcaattgagaataacgaccagaggagctg 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19309 tgacagccaactctggattgactatctatgtgcaattgagaataacgaccagaggagctg 19368 Query: 325 ccagatggtagatcctaaagagcagatatggtagaggttaaagcttaaatttgaaatgct 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19369 ccagatggtagatcctaaagagcagatatggtagaggttaaagcttaaatttgaaatgct 19428 Query: 385 gccgaatcgaaattataaactgtggtgtcggatccaatgatgcagtgtcacgtgatgcga 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19429 gccgaatcgaaattataaactgtggtgtcggatccaatgatgcagtgtcacgtgatgcga 19488 Query: 445 cgggaataagagtcattggcctcaaaccaagggagggatagcgactggcgaggggagacg 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19489 cgggaataagagtcattggcctcaaaccaagggagggatagcgactggcgaggggagacg 19548 Query: 505 gactcaaccacacaagtacaaatgtgtaattgtgtttttgtccactgtactatgtgaatt 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19549 gactcaaccacacaagtacaaatgtgtaattgtgtttttgtccactgtactatgtgaatt 19608 Query: 565 gaaaccttcctacataataagagtttgagaattccaagttgattcctcatacgtaatgat 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19609 gaaaccttcctacataataagagtttgagaattccaagttgattcctcatacgtaatgat 19668 Query: 625 atataatgatattcgatagtatacacacacattctatatggggacagaagtatttc-tca 683 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 19669 atataatgatattcgatagtatacacacacattctatatggggacagaagtatttcttca 19728 Query: 684 taggtatggctgcacgtcttctccatcatagatcgtgaacggtttatcgtgtcctacaat 743 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 19729 taggtatggctgcacgtcttctccatcatagattgtgaacggtttatcgtgtcctacaat 19788 Query: 744 ggcaatggataagttcttggttact-aaagtttcgtcttttaaagagtgtcttagagcct 802 |||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||| Sbjct: 19789 ggcaatggataagttcttgg-tactcaaagtttcgtctttcaaagagtgtcttagagcct 19847 Query: 803 ctacttcgctgcttgatcaactcatctgcatcttcaatctcgcgggaatcattgagcaca 862 ||||| || |||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 19848 ctactccg-tgcttgatcaactcatctgcatcttcaatctcgcggaaatcatcgagcaca 19906 Query: 863 cgtttcagatattgtcttaccaccttgggaccttacaccgatagctgtaccgtaccgttc 922 |||| |||||| ||||||| ||||||||||||| ||||||||||||| |||||| ||| Sbjct: 19907 cgttccagata-tgtcttagcaccttgggacctagcaccgatagctgtcccgtacaattc 19965 Query: 923 nagcgtgtttccaggatggttgggattctaata 955 |||||||| ||| ||||||||| ||||||||| Sbjct: 19966 gagcgtgttccca-gatggttggaattctaata 19997 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5357 Number of Sequences: 1807 Number of extensions: 5357 Number of successful extensions: 29 Number of sequences better than 1.0e-20: 1 length of query: 959 length of database: 10,358,551 effective HSP length: 16 effective length of query: 943 effective length of database: 10,329,639 effective search space: 9740849577 effective search space used: 9740849577 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)