BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC16ZG04FM1.SCF screened BAC_end
         (959 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1770                                                        1503   0.0  

>3x_Contig1770 
          Length = 29267

 Score = 1503 bits (758), Expect = 0.0
 Identities = 850/873 (97%), Gaps = 6/873 (0%)
 Strand = Plus / Plus

                                                                         
Query: 85    aaaccagccttccaaacaggtgtcactgatagtgaacggaacataatcatactgagtttc 144
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19129 aaaccagccttccaaacaggtgtcactgatagtgaacggaacataatcatactgagtttc 19188

                                                                         
Query: 145   cgagtcgcgttcctgtcttggtggtactatggtaatatgtccgacacactcttttgaagc 204
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19189 cgagtcgcgttcctgtcttggtggtactatggtaatatgtccgacacactcttttgaagc 19248

                                                                         
Query: 205   aatctttgacacttatttatagaaactgcgggaaccagtataactaccaagccggaacga 264
             |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19249 aatctttgacacttaagtatagaaactgcgggaaccagtataactaccaagccggaacga 19308

                                                                         
Query: 265   tgacagccaactctggattgactatctatgtgcaattgagaataacgaccagaggagctg 324
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19309 tgacagccaactctggattgactatctatgtgcaattgagaataacgaccagaggagctg 19368

                                                                         
Query: 325   ccagatggtagatcctaaagagcagatatggtagaggttaaagcttaaatttgaaatgct 384
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19369 ccagatggtagatcctaaagagcagatatggtagaggttaaagcttaaatttgaaatgct 19428

                                                                         
Query: 385   gccgaatcgaaattataaactgtggtgtcggatccaatgatgcagtgtcacgtgatgcga 444
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19429 gccgaatcgaaattataaactgtggtgtcggatccaatgatgcagtgtcacgtgatgcga 19488

                                                                         
Query: 445   cgggaataagagtcattggcctcaaaccaagggagggatagcgactggcgaggggagacg 504
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19489 cgggaataagagtcattggcctcaaaccaagggagggatagcgactggcgaggggagacg 19548

                                                                         
Query: 505   gactcaaccacacaagtacaaatgtgtaattgtgtttttgtccactgtactatgtgaatt 564
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19549 gactcaaccacacaagtacaaatgtgtaattgtgtttttgtccactgtactatgtgaatt 19608

                                                                         
Query: 565   gaaaccttcctacataataagagtttgagaattccaagttgattcctcatacgtaatgat 624
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19609 gaaaccttcctacataataagagtttgagaattccaagttgattcctcatacgtaatgat 19668

                                                                         
Query: 625   atataatgatattcgatagtatacacacacattctatatggggacagaagtatttc-tca 683
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 19669 atataatgatattcgatagtatacacacacattctatatggggacagaagtatttcttca 19728

                                                                         
Query: 684   taggtatggctgcacgtcttctccatcatagatcgtgaacggtttatcgtgtcctacaat 743
             ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 19729 taggtatggctgcacgtcttctccatcatagattgtgaacggtttatcgtgtcctacaat 19788

                                                                         
Query: 744   ggcaatggataagttcttggttact-aaagtttcgtcttttaaagagtgtcttagagcct 802
             |||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||
Sbjct: 19789 ggcaatggataagttcttgg-tactcaaagtttcgtctttcaaagagtgtcttagagcct 19847

                                                                         
Query: 803   ctacttcgctgcttgatcaactcatctgcatcttcaatctcgcgggaatcattgagcaca 862
             ||||| || |||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 19848 ctactccg-tgcttgatcaactcatctgcatcttcaatctcgcggaaatcatcgagcaca 19906

                                                                         
Query: 863   cgtttcagatattgtcttaccaccttgggaccttacaccgatagctgtaccgtaccgttc 922
             |||| |||||| ||||||| |||||||||||||  ||||||||||||| ||||||  |||
Sbjct: 19907 cgttccagata-tgtcttagcaccttgggacctagcaccgatagctgtcccgtacaattc 19965

                                              
Query: 923   nagcgtgtttccaggatggttgggattctaata 955
              |||||||| ||| ||||||||| |||||||||
Sbjct: 19966 gagcgtgttccca-gatggttggaattctaata 19997


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5357
Number of Sequences: 1807
Number of extensions: 5357
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 959
length of database: 10,358,551
effective HSP length: 16
effective length of query: 943
effective length of database: 10,329,639
effective search space: 9740849577
effective search space used: 9740849577
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)