BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC16ZG04RM1.SCF screened BAC_end (918 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1159 1641 0.0 >3x_Contig1159 Length = 4873 Score = 1641 bits (828), Expect = 0.0 Identities = 867/876 (98%), Gaps = 3/876 (0%) Strand = Plus / Minus Query: 45 gcttgtatctttgatgaactcta-ttcacctcgtgtgaaatgtcaagctactttggcctt 103 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1475 gcttgtatctttgatgaactctacttcacctcgtgtgaaatgtcaagctactttggcctt 1416 Query: 104 gagaaacttagcttcagataccaactaccaattggagattgttagagctggtggattacc 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1415 gagaaacttagcttcagataccaactaccaattggagattgttagagctggtggattacc 1356 Query: 164 agacttggttcaattgattcagtcggattctttaccattagtcttggccagcgtcgcatg 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1355 agacttggttcaattgattcagtcggattctttaccattagtcttggccagcgtcgcatg 1296 Query: 224 tatcagaaatatttccatccatccattaaacgaaggtctaattgtagatgccggatttct 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1295 tatcagaaatatttccatccatccattaaacgaaggtctaattgtagatgccggatttct 1236 Query: 284 accacctttagtaaaattgcttgattaccaagaatcagaagaaattcaatgtcatgctgt 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1235 accacctttagtaaaattgcttgattaccaagaatcagaagaaattcaatgtcatgctgt 1176 Query: 344 ttcaactttaagaaacttggctgcttcatctgaaaaaaatagagcagagttcttccaatc 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1175 ttcaactttaagaaacttggctgcttcatctgaaaaaaatagagcagagttcttccaatc 1116 Query: 404 tggtgtaattgaaaaattcaagcaacttgccttgacatgtcccatcagcgttcaaagtga 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1115 tggtgtaattgaaaaattcaagcaacttgccttgacatgtcccatcagcgttcaaagtga 1056 Query: 464 aattagtgcttgctttgctatcttggcactttcagataatactaaatatgatcttttgca 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1055 aattagtgcttgctttgctatcttggcactttcagataatactaaatatgatcttttgca 996 Query: 524 acaagacgtactaaaagttttgatcccaatgacaatgtcccaggaccaagagatctctgg 583 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 995 acaagacgtactaaaagttttgatcccaatgacaatgtcccaggaccaagagatctctgg 936 Query: 584 taactctgctgctgctgtagcaaacttgatctctagggtcagcaatttagagaaaatatt 643 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 935 taactctgctgctgctgtagcaaacttgatctctagggtcagcaatttagagaaaatatt 876 Query: 644 ggagtactggggtcaaccaaacgatggtatcaagggtttcttgatcagattcttgtctag 703 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 875 ggagtactggggtcaaccaaacgatggtatcaagggtttcttgatcagattcttgtctag 816 Query: 704 tgacttccctacctatgaacatattgctctatggaccattttacaactatttgaatgtca 763 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 tgacttccctacctatgaacatattgctctatggaccattttacaactatttgaatgtca 756 Query: 764 caacgaaaccatttacaagtttaattaaaga-gatcaaaaactcgtcaacggggtcaaga 822 ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 755 caacgaaaccatttacaagtt-aattaaagaagatcaaaaactcgtcaacggggtcaaga 697 Query: 823 aaatcgctgatgaaaactacgctgtggctagggaatacatgccagatggacaagatacca 882 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 696 aaatcgctgatgaaaactacgctgtggctagggaatacatgcaagatggacaagatacca 637 Query: 883 acattgatcactatggaaaatcggacattttagaag 918 ||||||||||| ||||||| ||| ||| | |||||| Sbjct: 636 acattgatcacaatggaaattcgaacaatatagaag 601 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7878 Number of Sequences: 1807 Number of extensions: 7878 Number of successful extensions: 62 Number of sequences better than 1.0e-20: 1 length of query: 918 length of database: 10,358,551 effective HSP length: 16 effective length of query: 902 effective length of database: 10,329,639 effective search space: 9317334378 effective search space used: 9317334378 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)