BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC16ZG11FM1.SCF screened BAC_end (949 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig88 1164 0.0 >3x_Contig88 Length = 1299 Score = 1164 bits (587), Expect = 0.0 Identities = 641/653 (98%), Gaps = 7/653 (1%) Strand = Plus / Minus Query: 87 tagaaaaatggataacagctctatttgatcttactttgccgttcggaaattatgatttca 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 676 tagaaaaatggataacagctctatttgatcttactttgccgttcggaaattatgatttca 617 Query: 147 cttcgatcaaggttcccgaatttgtggcttgcattcctagcaccaatgatacaggtacaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 616 cttcgatcaaggttcccgaatttgtggcttgcattcctagcaccaatgatacaggtacaa 557 Query: 207 tcattgtcagacgacagagtaccttaaatgaaacccttatccctaaaacaattcgagatt 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 556 tcattgtcagacgacagagtaccttaaatgaaacccttatccctaaaacaattcgagatt 497 Query: 267 catccg--tgttaac-ct-caatatcatcc--attttgt-ccatcaaaagagcaacacca 319 ||| || ||||| | || ||||||||| | ||||||| |||||||||||||||||||| Sbjct: 496 catgcgcgtgttagcgctgcaatatcatgcgcattttgtgccatcaaaagagcaacacca 437 Query: 320 aatgaattaaatttggtgttgcaattagataaaagaaagactaatgaagataatatcgtc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 aatgaattaaatttggtgttgcaattagataaaagaaagactaatgaagataatatcgtc 377 Query: 380 tcgatcaagaacgtcattttagctttgacttggaagttttctacttttaactgctgtatt 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 tcgatcaagaacgtcattttagctttgacttggaagttttctacttttaactgctgtatt 317 Query: 440 gttgatgttgaaggaatggtcatcaattgcggaactgctaacgatgttctcaattcgttg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 316 gttgatgttgaaggaatggtcatcaattgcggaactgctaacgatgttctcaattcgttg 257 Query: 500 gctggtccgataaaaagtaatggtaatcaaccattctctccagatcttttacaccaatta 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 gctggtccgataaaaagtaatggtaatcaaccattctctccagatcttttacaccaatta 197 Query: 560 tggtatcggcaaaaacagaaaatatgcaaaaatgttggggttgttgttttatcaaactca 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 tggtatcggcaaaaacagaaaatatgcaaaaatgttggggttgttgttttatcaaactca 137 Query: 620 tccatggagaatggtaaatcatgtctttttagcgattatcgaatattcgctgatgcaggc 679 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136 tccatggagaatggtaaatcatgtctttttagcgattatcgaatattcgctgatgcaggc 77 Query: 680 aaacggcatccaaatgaattaaaaataaaagtaggctttctgaatgtagatta 732 |||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 76 aaacggcatccaaatgaatttaatataaaagtaggctttctgaatgtagatta 24 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7526 Number of Sequences: 1807 Number of extensions: 7526 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 949 length of database: 10,358,551 effective HSP length: 16 effective length of query: 933 effective length of database: 10,329,639 effective search space: 9637553187 effective search space used: 9637553187 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)