BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC16ZH01FM1.SCF screened BAC_end
         (967 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1585                                                        1378   0.0  

>3x_Contig1585 
          Length = 11490

 Score = 1378 bits (695), Expect = 0.0
 Identities = 752/771 (97%)
 Strand = Plus / Plus

                                                                        
Query: 88   actacgactcataatagtaaagcatgcgagtattcattcgagtaaccaaggtccgtcata 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2194 actacgactcataatagtaaagcatgcgagtattcattcgagtaaccaaggtccgtcata 2253

                                                                        
Query: 148  tttacatttcctctcacagacacacgttttggtggttaaacgacttatgttggtaaaact 207
            |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||
Sbjct: 2254 tttacatttcctctcacagacacacgtcgtggtggttaaacgacttatgttggtaaaact 2313

                                                                        
Query: 208  aaggctgtgaactccttcttgattgctacactgtcgcctttaactgtgtcgtatgttatt 267
            |||||||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2314 aaggctgtgaacgccatcgtgattgctacactgtcgcctttaactgtgtcgtatgttatt 2373

                                                                        
Query: 268  tccagtttaattttactgatgagaggttcaaaaatttcatcaatgtgtaaagataagctg 327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2374 tccagtttaattttactgatgagaggttcaaaaatttcatcaatgtgtaaagataagctg 2433

                                                                        
Query: 328  gaaacgagtggatattgtaccaaatatatatatacactgtggtttaaacgatgagatttg 387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2434 gaaacgagtggatattgtaccaaatatatatatacactgtggtttaaacgatgagatttg 2493

                                                                        
Query: 388  atcgcctatatactcacagtagtatatgtaatgtttcttctagtaaacatggctcatatt 447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2494 atcgcctatatactcacagtagtatatgtaatgtttcttctagtaaacatggctcatatt 2553

                                                                        
Query: 448  ttccgtatgtgaaaccagtcacaccttacaatatgaaccatgtttcggtcttgaagggtt 507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2554 ttccgtatgtgaaaccagtcacaccttacaatatgaaccatgtttcggtcttgaagggtt 2613

                                                                        
Query: 508  ctaccgtcctcataattcagtcgtttatattcctctttttttacagcatccggtaaacaa 567
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2614 ctaccgtcctcataattcagtcgtttatattcctctttttttacagcatccggtaaacaa 2673

                                                                        
Query: 568  gttaaagtaaataaacctctataacagcagaactggatatcgtttggaattggtggtaga 627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2674 gttaaagtaaataaacctctataacagcagaactggatatcgtttggaattggtggtaga 2733

                                                                        
Query: 628  acttgacgtaggtgttattataggccacatcaattgttgccatagtgagttgatcattta 687
              |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2734 ctttgacgtaggtgttattagaggccacatcaattgttgccatagtgagttgatcattta 2793

                                                                        
Query: 688  agaatcaactattcaggatatgacttcagtttagcttcctctttttgttttcttcatgga 747
            ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 2794 agaatcaactattcaggatatgacttcagtttagcttcctcttttcgttttcttcatgaa 2853

                                                                        
Query: 748  atttttctttaagtgcgtgccggccgtataatgctgataatgaacatgatgttgcaaaaa 807
             ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2854 ttttttctttaagtgcgtgccggccgtataatgctgataatgaacaggatgttgcaaaaa 2913

                                                               
Query: 808  cagggattggattctctatatgaatttcgcagaatgccatttaattttttc 858
            ||||  ||| ||   |||||||||||||||||||||||||||||| |||||
Sbjct: 2914 caggatttgcatctcctatatgaatttcgcagaatgccatttaatattttc 2964


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9565
Number of Sequences: 1807
Number of extensions: 9565
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 967
length of database: 10,358,551
effective HSP length: 16
effective length of query: 951
effective length of database: 10,329,639
effective search space: 9823486689
effective search space used: 9823486689
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)