BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC16ZH02RM1.SCF screened BAC_end
         (945 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1655                                                        1437   0.0  

>3x_Contig1655 
          Length = 16228

 Score = 1437 bits (725), Expect = 0.0
 Identities = 808/825 (97%), Gaps = 8/825 (0%)
 Strand = Plus / Minus

                                                                         
Query: 45    cttaggaactttcc-tcagcttttggtgggtagagaggaatacaaagaactaggacccga 103
             |||||||||||||| |||||||| ||| ||||||||||||||| ||||| ||||||||||
Sbjct: 15729 cttaggaactttccatcagctttgggtaggtagagaggaatacgaagaagtaggacccga 15670

                                                                         
Query: 104   aagattacttaaagataggttcaggtaattaaggtaatcatagaagattagttaaatatg 163
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15669 aagattacttaaagataggttcaggtaattaaggtaatcatagaagattagttaaatatg 15610

                                                                         
Query: 164   ggatcttatgtcagttacat-cttatt-cttttaaactattattcagaaactttttttta 221
             |||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||
Sbjct: 15609 ggatcttatgtcagttacatgcttatttcttttaaactattattcagaaactttcgttta 15550

                                                                         
Query: 222   ttttgttttcctagggttcatttcgaatgaaaagatgctattacttttaaatagcttcaa 281
             |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 15549 ttttgttttcctagggttcatttcgaatgaaaagatgcgactacttttaaatagcttcaa 15490

                                                                         
Query: 282   gtttgcatattccctttatcaaaagctcttgacaacacttctccaaggcaaccaccctac 341
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15489 gtttgcatattccctttatcaaaagctcttgacaacacttctccaaggcaaccaccctac 15430

                                                                         
Query: 342   cattaactaggctggatgcatcatggaattcggctttactcttgatcaatactttggggt 401
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15429 cattaactaggctggatgcatcatggaattcggctttactcttgatcaatactttggggt 15370

                                                                         
Query: 402   ctttaatttgaattttcaaagaaagtgactcaactgcattagatagcattgtttggtttt 461
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15369 ctttaatttgaattttcaaagaaagtgactcaactgcattagatagcattgtttggtttt 15310

                                                                         
Query: 462   gttccaagatatgcgtgagattgtgagatggatcacaaaaaactccgattgcatacgacc 521
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15309 gttccaagatatgcgtgagattgtgagatggatcacaaaaaactccgattgcatacgacc 15250

                                                                         
Query: 522   atttcaataccgaacgaccatgtaacaatattttaattgattcggataagaactgtcctt 581
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15249 atttcaataccgaacgaccatgtaacaatattttaattgattcggataagaactgtcctt 15190

                                                                         
Query: 582   cgatccacgatattcccaattctttttgaagtgtgaatattttggactctatagtaccgg 641
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15189 cgatccacgatattcccaattctttttgaagtgtgaatattttggactctatagtaccgg 15130

                                                                         
Query: 642   ccaatttaaggtccaaatctgacgaattttcatgtacaataaacattttataaccatctg 701
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15129 ccaatttaaggtccaaatctgacgaattttcatgtacaataaacattttataaccatctg 15070

                                                                         
Query: 702   tgaaccgttttgttattgacttattaattgggttatctttcttttcattttggaatttac 761
             |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 15069 tgaaccgttttgttattgacttattaattgtgttatctttcttttcattttggaatttac 15010

                                                                         
Query: 762   acacatagttgtcggtatgtatgggcccacttcccatcgcaaatccaacaaaacttcgga 821
             |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 15009 acacatagttgtcggtatgtat-ggcccacttcccatcgcaaatccaacaaaac-tcgga 14952

                                                          
Query: 822   atggcagcttctgacatgtcatatgggttgcaaccttccgttttt 866
             |||||||| ||||||||||||||| |||||||||| |||||||||
Sbjct: 14951 atggcagc-tctgacatgtcatat-ggttgcaacc-tccgttttt 14910


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9014
Number of Sequences: 1807
Number of extensions: 9014
Number of successful extensions: 78
Number of sequences better than 1.0e-20: 1
length of query: 945
length of database: 10,358,551
effective HSP length: 16
effective length of query: 929
effective length of database: 10,329,639
effective search space: 9596234631
effective search space used: 9596234631
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)