BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC16ZH03FM1.SCF screened BAC_end (979 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1338 1616 0.0 >3x_Contig1338 Length = 8134 Score = 1616 bits (815), Expect = 0.0 Identities = 861/871 (98%), Gaps = 4/871 (0%) Strand = Plus / Minus Query: 86 tcaaagttgatttttgcaatttctcatcataaacagcggtcaatctggcaatacctttac 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1075 tcaaagttgatttttgcaatttctcatcataaacagcggtcaatctggcaatacctttac 1016 Query: 146 cactacccaatttattttcaaaagtgtaataaacttgaacccattccacaggaggtctac 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1015 cactacccaatttattttcaaaagtgtaataaacttgaacccattccacaggaggtctac 956 Query: 206 ctgattttggttcatgcttcaacaccttaccgtaaccggaagtgtatctataatcggcca 265 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 955 ctgattttggttcatgcatcaacaccttaccgtaaccggaagtgtatctataatcggcca 896 Query: 266 atttatccaattggaaattggacaatttagccttggacaatagcggttgtaaatcgtttg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 895 atttatccaattggaaattggacaatttagccttggacaatagcggttgtaaatcgtttg 836 Query: 326 acaagttttccaaaccgatgaaagaatgtaaatcaaaagtgacacctaaatgatctctcc 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 835 acaagttttccaaaccgatgaaagaatgtaaatcaaaagtgacacctaaatgatctctcc 776 Query: 386 aggtaccgtggtttccaaacaaccgagaccagtcttcttctgaaaccgatgtggaaccgg 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 775 aggtaccgtggtttccaaacaaccgagaccagtcttcttctgaaaccgatgtggaaccgg 716 Query: 446 aattgatcttattcatcaaaacattgaattgttcgaaccattcgtcaaccaatggtccga 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 715 aattgatcttattcatcaaaacattgaattgttcgaaccattcgtcaaccaatggtccga 656 Query: 506 tcttggattcatcagcaatcaactctggagaagcagtaacattaacaccgtacactttct 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 655 tcttggattcatcagcaatcaactctggagaagcagtaacattaacaccgtacactttct 596 Query: 566 ctaatggtaaatcatcggaaacagcttcgtgaagaattggagggtaaacttccttattgt 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 595 ctaatggtaaatcatcggaaacagcttcgtgaagaattggagggtaaacttccttattgt 536 Query: 626 agaaatcttcctcgtgtagtattttcttcatatcctggacattttccgcttctggaaaag 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 535 agaaatcttcctcgtgtagtattttcttcatatcctggacattttccgcttctggaaaag 476 Query: 686 taccttcagaagatttagtttgtttcaaagcgtgagcgacaccgtcaagtgtattattca 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 475 taccttcagaagatttagtttgtttcaaagcgtgagcgacaccgtcaagtgtattattca 416 Query: 746 aaccgacagtcgcgacaggagccatatttaatgtgtttgcgtataccttttttttatttc 805 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 415 aaccgacagtcgcgacaggagccataattaatgtgtttgcgtataccttttttttatttc 356 Query: 806 accctaataaaggagttattgtttgtttgtttgtttgtttggttggttggtagggatgta 865 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 355 accctaataaaggagttattgtttgtttgtttgtttgtttggttggttggtagggatgta 296 Query: 866 gatatgatgaatacaataaattggaatggnagttgagatggacatttggtttcagnataa 925 ||||||||||||||||||||||||||||| || ||||||||||| |||||| ||| || | Sbjct: 295 gatatgatgaatacaataaattggaatgg-ag-tgagatggacaattggttacag-atga 239 Query: 926 aacccatctatttattacattttttttctat 956 |||||||||||||| |||| ||||||||||| Sbjct: 238 aacccatctattta-tacaatttttttctat 209 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8742 Number of Sequences: 1807 Number of extensions: 8742 Number of successful extensions: 109 Number of sequences better than 1.0e-20: 1 length of query: 979 length of database: 10,358,551 effective HSP length: 16 effective length of query: 963 effective length of database: 10,329,639 effective search space: 9947442357 effective search space used: 9947442357 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)