BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC16ZH05FM1.SCF screened BAC_end (931 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1647 1616 0.0 >3x_Contig1647 Length = 14353 Score = 1616 bits (815), Expect = 0.0 Identities = 839/843 (99%), Gaps = 3/843 (0%) Strand = Plus / Plus Query: 86 tcagttattgaagagttagaaagagaattagacccttcagattcagaatctgtggaggaa 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11233 tcagttattgaagagttagaaagagaattagacccttcagattcagaatctgtggaggaa 11292 Query: 146 actgtttctgatgagaatgcagaagaaactcctgaggcaataatgcccaagaacattgat 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11293 actgtttctgatgagaatgcagaagaaactcctgaggcaataatgcccaagaacattgat 11352 Query: 206 actgatgaatgtgtagatatcattctttcaaacgatgtcaaagcgggagaagaaatattc 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11353 actgatgaatgtgtagatatcattctttcaaacgatgtcaaagcgggagaagaaatattc 11412 Query: 266 aactcgtatggtgaccattccaactcgtacctattagccaggtacggattttgcatcgag 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11413 aactcgtatggtgaccattccaactcgtacctattagccaggtacggattttgcatcgag 11472 Query: 326 gataatccacacgatgtagttgatttatcggaagagttggtggagtatggacaaaagaat 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11473 gataatccacacgatgtagttgatttatcggaagagttggtggagtatggacaaaagaat 11532 Query: 386 tccaaacggattggagataggatggaatggtgggaggatgaagtacatgcggtgtacaaa 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11533 tccaaacggattggagataggatggaatggtgggaggatgaagtacatgcggtgtacaaa 11592 Query: 446 gagtggtacgaggcaacaagagaggagtcagaagaggaggaagaggaggaagagggagaa 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11593 gagtggtacgaggcaacaagagaggagtcagaagaggaggaagaggaggaagagggagaa 11652 Query: 506 gagggagaagaggaggagaacgagaacgagtccccagcctccgactctgattcgacgtcc 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11653 gagggagaagaggaggagaacgagaacgagtccccagcctccgactctgattcgacgtcc 11712 Query: 566 tcagaactttcttcggaagaaaccccagaagaaaatgacgcctggggatacgtccaccta 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11713 tcagaactttcttcggaagaaaccccagaagaaaatgacgcctggggatacgtccaccta 11772 Query: 626 aaacactccggaaaaccgaatgatgtgctcctagctatcttgaacctactgacaatgtct 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11773 aaacactccggaaaaccgaatgatgtgctcctagctatcttgaacctactgacaatgtct 11832 Query: 686 ccatcaatgtacaagaacctttcgagcgccagaggagatgtagagaaacttgccaagaaa 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11833 ccatcaatgtacaagaacctttcgagcgccagaggagatgtagagaaacttgccaagaaa 11892 Query: 746 ctaccactgttggaagccaaactatcaggcgacgggaaaaagttactgaaacaaatatgt 805 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 11893 ctaccactgttggaagccaaactatcaggcgacgggaaaaggttactgaaacaaatatgt 11952 Query: 806 gctgccaagaagtacgcaaaactgccgtcagaccttaaaacttnacaacttgc-acaaat 864 ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| Sbjct: 11953 gctgccaagaagtacgcaaaactgccgtcagaccttaaaactt-acaacttgcaacaaat 12011 Query: 865 agaattactgataaactctgagaagcagatcctaaatcgagttcaggtaggatagctgca 924 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 12012 agaattactgataaactctgagaagcagatcctaaatcgag-tcaggtaggatagctgca 12070 Query: 925 tcc 927 ||| Sbjct: 12071 tcc 12073 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5997 Number of Sequences: 1807 Number of extensions: 5997 Number of successful extensions: 90 Number of sequences better than 1.0e-20: 1 length of query: 931 length of database: 10,358,551 effective HSP length: 16 effective length of query: 915 effective length of database: 10,329,639 effective search space: 9451619685 effective search space used: 9451619685 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)