BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC16ZH05FM1.SCF screened BAC_end
         (931 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1647                                                        1616   0.0  

>3x_Contig1647 
          Length = 14353

 Score = 1616 bits (815), Expect = 0.0
 Identities = 839/843 (99%), Gaps = 3/843 (0%)
 Strand = Plus / Plus

                                                                         
Query: 86    tcagttattgaagagttagaaagagaattagacccttcagattcagaatctgtggaggaa 145
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11233 tcagttattgaagagttagaaagagaattagacccttcagattcagaatctgtggaggaa 11292

                                                                         
Query: 146   actgtttctgatgagaatgcagaagaaactcctgaggcaataatgcccaagaacattgat 205
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11293 actgtttctgatgagaatgcagaagaaactcctgaggcaataatgcccaagaacattgat 11352

                                                                         
Query: 206   actgatgaatgtgtagatatcattctttcaaacgatgtcaaagcgggagaagaaatattc 265
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11353 actgatgaatgtgtagatatcattctttcaaacgatgtcaaagcgggagaagaaatattc 11412

                                                                         
Query: 266   aactcgtatggtgaccattccaactcgtacctattagccaggtacggattttgcatcgag 325
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11413 aactcgtatggtgaccattccaactcgtacctattagccaggtacggattttgcatcgag 11472

                                                                         
Query: 326   gataatccacacgatgtagttgatttatcggaagagttggtggagtatggacaaaagaat 385
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11473 gataatccacacgatgtagttgatttatcggaagagttggtggagtatggacaaaagaat 11532

                                                                         
Query: 386   tccaaacggattggagataggatggaatggtgggaggatgaagtacatgcggtgtacaaa 445
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11533 tccaaacggattggagataggatggaatggtgggaggatgaagtacatgcggtgtacaaa 11592

                                                                         
Query: 446   gagtggtacgaggcaacaagagaggagtcagaagaggaggaagaggaggaagagggagaa 505
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11593 gagtggtacgaggcaacaagagaggagtcagaagaggaggaagaggaggaagagggagaa 11652

                                                                         
Query: 506   gagggagaagaggaggagaacgagaacgagtccccagcctccgactctgattcgacgtcc 565
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11653 gagggagaagaggaggagaacgagaacgagtccccagcctccgactctgattcgacgtcc 11712

                                                                         
Query: 566   tcagaactttcttcggaagaaaccccagaagaaaatgacgcctggggatacgtccaccta 625
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11713 tcagaactttcttcggaagaaaccccagaagaaaatgacgcctggggatacgtccaccta 11772

                                                                         
Query: 626   aaacactccggaaaaccgaatgatgtgctcctagctatcttgaacctactgacaatgtct 685
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11773 aaacactccggaaaaccgaatgatgtgctcctagctatcttgaacctactgacaatgtct 11832

                                                                         
Query: 686   ccatcaatgtacaagaacctttcgagcgccagaggagatgtagagaaacttgccaagaaa 745
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11833 ccatcaatgtacaagaacctttcgagcgccagaggagatgtagagaaacttgccaagaaa 11892

                                                                         
Query: 746   ctaccactgttggaagccaaactatcaggcgacgggaaaaagttactgaaacaaatatgt 805
             |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 11893 ctaccactgttggaagccaaactatcaggcgacgggaaaaggttactgaaacaaatatgt 11952

                                                                         
Query: 806   gctgccaagaagtacgcaaaactgccgtcagaccttaaaacttnacaacttgc-acaaat 864
             ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 11953 gctgccaagaagtacgcaaaactgccgtcagaccttaaaactt-acaacttgcaacaaat 12011

                                                                         
Query: 865   agaattactgataaactctgagaagcagatcctaaatcgagttcaggtaggatagctgca 924
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 12012 agaattactgataaactctgagaagcagatcctaaatcgag-tcaggtaggatagctgca 12070

                
Query: 925   tcc 927
             |||
Sbjct: 12071 tcc 12073


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5997
Number of Sequences: 1807
Number of extensions: 5997
Number of successful extensions: 90
Number of sequences better than 1.0e-20: 1
length of query: 931
length of database: 10,358,551
effective HSP length: 16
effective length of query: 915
effective length of database: 10,329,639
effective search space: 9451619685
effective search space used: 9451619685
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)