BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC16ZH08FM1.SCF screened BAC_end (923 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1744 1544 0.0 >3x_Contig1744 Length = 24119 Score = 1544 bits (779), Expect = 0.0 Identities = 819/829 (98%), Gaps = 3/829 (0%) Strand = Plus / Plus Query: 87 taccaaacctattgtggttgtcgatttaccttcacccaaaggagttggagtaataccggc 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15921 taccaaacctattgtggttgtcgatttaccttcacccaaaggagttggagtaataccggc 15980 Query: 147 aacaagaacgtacttaccgttctcgttatctgccaatctattcgcaattttgggagaaac 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15981 aacaagaacgtacttaccgttctcgttatctgccaatctattcgcaattttgggagaaac 16040 Query: 207 tttcgccttatttttaccatatagttctagttcacttggatgtacaccaagttcattggc 266 ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16041 tttcgccttataatgaccatatagttctagttcacttggatgtacaccaagttcattggc 16100 Query: 267 aactgcttcaatgtatttcggcttttgctttcttgagatttcaatgtcagatggcacttt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16101 aactgcttcaatgtatttcggcttttgctttcttgagatttcaatgtcagatggcacttt 16160 Query: 327 tgcttcaatcttgagaggcaatggtttaatatgtggcattctagtggattcctctctttg 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16161 tgcttcaatcttgagaggcaatggtttaatatgtggcattctagtggattcctctctttg 16220 Query: 387 cctcttggcagccaaaagaacgttttgaaccaacatcgcaactgtcattggaccaactcc 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16221 cctcttggcagccaaaagaacgttttgaaccaacatcgcaactgtcattggaccaactcc 16280 Query: 447 acctggtacaggtgtaatgtaagaagccttgtctttacacaactcaaagtcgacgtcacc 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16281 acctggtacaggtgtaatgtaagaagccttgtctttacacaactcaaagtcgacgtcacc 16340 Query: 507 gaccaacttcctaccggattttttggatgcgtctgggacatagttaataccgacatcaat 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16341 gaccaacttcctaccggattttttggatgcgtctgggacatagttaataccgacatcaat 16400 Query: 567 gacgatagcatcttgctttaaccagtttggtttgaccatgtttggcacaccacaagcagc 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16401 gacgatagcatcttgctttaaccagtttggtttgaccatgtttggcacaccacaagcagc 16460 Query: 627 tatgactacatcggcattttttacaacatcggcaatgttctcagtgtatctatggcaaat 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16461 tatgactacatcggcattttttacaacatcggcaatgttctcagtgtatctatggcaaat 16520 Query: 687 tgtgactgttgcatttaaatcctttaacaatgatgcaacgggagttcccacaatgtcaga 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16521 tgtgactgttgcatttaaatcctttaacaatgatgcaacgggagttcccacaatgtcaga 16580 Query: 747 tcttccaataacaacagcgcgcttncctctcaaatcaataccagattctttcaacaatcg 806 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 16581 tcttccaataacaacagcgcgcttccctctcaaatcaataccagattctttcaacaatcg 16640 Query: 807 gatacaaccgttaggggtacatggaatgaaatatggcttacc-nctctttttgataatt- 864 |||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||| Sbjct: 16641 gatacaaccgttaggggtacatggaatgaagtatggcttaccacctctctttgataattc 16700 Query: 865 accaacattgaaa-gatggaatccgtcgacatccttttggtacgaaaca 912 ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 16701 accaacattgaaacgatggaatccgtcgacatccttttggtacgaaaca 16749 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5531 Number of Sequences: 1807 Number of extensions: 5531 Number of successful extensions: 40 Number of sequences better than 1.0e-20: 1 length of query: 923 length of database: 10,358,551 effective HSP length: 16 effective length of query: 907 effective length of database: 10,329,639 effective search space: 9368982573 effective search space used: 9368982573 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)