BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC17ZA04FM1.SCF screened BAC_end (967 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1585 1550 0.0 >3x_Contig1585 Length = 11490 Score = 1550 bits (782), Expect = 0.0 Identities = 861/881 (97%), Gaps = 6/881 (0%) Strand = Plus / Plus Query: 86 actacgactcataatagtaaagcatgcgagtattcattcgagtaaccaaggtccgtcata 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2194 actacgactcataatagtaaagcatgcgagtattcattcgagtaaccaaggtccgtcata 2253 Query: 146 tttacatttcctctcacagacacacgtcgtggtggttaaacgacttatgttggtaaaact 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2254 tttacatttcctctcacagacacacgtcgtggtggttaaacgacttatgttggtaaaact 2313 Query: 206 aaggctgtgaacgctcttcgtgattgctacactgtcgcctttaactgtgtcgtatgttat 265 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2314 aaggctgtgaacgc-catcgtgattgctacactgtcgcctttaactgtgtcgtatgttat 2372 Query: 266 ttccagtttaattttactgatgagaggttcaaaaatttcatcaatgtgtaaagataagct 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2373 ttccagtttaattttactgatgagaggttcaaaaatttcatcaatgtgtaaagataagct 2432 Query: 326 ggaaacgagtggatattgtaccaaatatatatatacactgtggtttaaacgatgagattt 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2433 ggaaacgagtggatattgtaccaaatatatatatacactgtggtttaaacgatgagattt 2492 Query: 386 gatcgcctatatactcacagtagtatatgtaatgtttcttctagtaaacatggctcatat 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2493 gatcgcctatatactcacagtagtatatgtaatgtttcttctagtaaacatggctcatat 2552 Query: 446 tttccgtatgtgaaaccagtcacaccttacaatatgaaccatgtttcggtcttgaagggt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2553 tttccgtatgtgaaaccagtcacaccttacaatatgaaccatgtttcggtcttgaagggt 2612 Query: 506 tctaccgtcctcataattcagtcgtttatattcctctttttttacagcatccggtaaaca 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2613 tctaccgtcctcataattcagtcgtttatattcctctttttttacagcatccggtaaaca 2672 Query: 566 agttaaagtaaataaacctctataacagcagaactggatatcgtttggaattggtggtag 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2673 agttaaagtaaataaacctctataacagcagaactggatatcgtttggaattggtggtag 2732 Query: 626 actttgacgtaggtgttattagaggccacatcaattgttgccatagtgagttgatcattt 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2733 actttgacgtaggtgttattagaggccacatcaattgttgccatagtgagttgatcattt 2792 Query: 686 aagaatcaactattcaggatatgacttcagtttagcttcctcttttcgttttcttcatga 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2793 aagaatcaactattcaggatatgacttcagtttagcttcctcttttcgttttcttcatga 2852 Query: 746 attttttctttaagtgcgtgccggccgtataatgctgataatgaacaggatgttgcanan 805 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 2853 attttttctttaagtgcgtgccggccgtataatgctgataatgaacaggatgttgcaaaa 2912 Query: 806 acaggatttgcatctnctatatgaatttcgcagaatgccattttatatttttcctgncat 865 ||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||| || Sbjct: 2913 acaggatttgcatctcctatatgaatttcgcagaatgccatttaata-ttttcctgcaat 2971 Query: 866 tcaataatagccccaacaggggttcttcacgtttgttctcacttcgcatgcgttggaaat 925 ||||||||| ||||||| |||||| |||||||||||||||| |||||||| ||||||| Sbjct: 2972 ccaataatag-cccaaca-aggttctccacgtttgttctcactccgcatgcg-tggaaat 3028 Query: 926 tcaaaagggattttcattccattggcctggttcacgnatga 966 ||||||||||||||||| | ||| |||||||||||| |||| Sbjct: 3029 tcaaaagggattttcatacaatt-gcctggttcacgaatga 3068 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8620 Number of Sequences: 1807 Number of extensions: 8620 Number of successful extensions: 51 Number of sequences better than 1.0e-20: 1 length of query: 967 length of database: 10,358,551 effective HSP length: 16 effective length of query: 951 effective length of database: 10,329,639 effective search space: 9823486689 effective search space used: 9823486689 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)