BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC17ZA04RM1.SCF screened BAC_end
         (911 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1789                                                        1624   0.0  

>3x_Contig1789 
          Length = 30977

 Score = 1624 bits (819), Expect = 0.0
 Identities = 856/866 (98%), Gaps = 2/866 (0%)
 Strand = Plus / Minus

                                                                        
Query: 46   taaagaagcaggacatagttagatcccatgcgatgagcttcaaactagaacagaatactt 105
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1948 taaagaagcaggacatagttagatcccatgcgatgagcttcaaactagaacagaatactt 1889

                                                                        
Query: 106  gctggtttcaggcgtttcatctctggtttttgctattttaaataattttgaactttaatt 165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1888 gctggtttcaggcgtttcatctctggtttttgctattttaaataattttgaactttaatt 1829

                                                                        
Query: 166  cgatacgtgctctaaaaaaaggctaggaactgtaatatcatggctagagtaagaggtaga 225
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1828 cgatacgtgctctaaaaacaggctaggaactgtaatatcatggctagagtaagaggtaga 1769

                                                                        
Query: 226  aagctaataaaaaagctcaagaaagatgagttccatccagaagacaataaaacccatgat 285
            |||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1768 aagctaataacacagctcaagacagatgagttccatccagaagacaataaaacccatgat 1709

                                                                        
Query: 286  gagcctacggttagccatgttaatgaaactgctgggggtgacaatagtgatgtgagtcct 345
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1708 gagcctacggttagccatgttaatgaaactgctgggggtgacaatagtgatgtgagtcct 1649

                                                                        
Query: 346  aatactttctttggtgtcctagattctggcgaattggattattttaagaaggctgaatcc 405
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1648 aatactttctttggtgtcctagattctggcgaattggattattttaagaaggctgaatcc 1589

                                                                        
Query: 406  acgttggctattgatacatttgagaatccagatgagaagtaccagtttatcaacagtgtc 465
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1588 acgttggctattgatacatttgagaatccagatgagaagtaccagtttatcaacagtgtc 1529

                                                                        
Query: 466  atcgaggaaagtaagggtaaagagttgaaacttgctacgtctcagatttcttctaagcta 525
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1528 atcgaggaaagtaagggtaaagagttgaaacttgctacgtctcagatttcttctaagcta 1469

                                                                        
Query: 526  atggaacgtattattatggaaagtgatgaaactcaattgaagactatcttcaaagctttc 585
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1468 atggaacgtattattatggaaagtgatgaaactcaattgaagactatcttcaaagctttc 1409

                                                                        
Query: 586  aatgggttttatttcaaccttgcatgtcacaaatattcctcccatgttttagagactcta 645
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1408 aatgggttttatttcaaccttgcatgtcacaaatattcctcccatgttttagagactcta 1349

                                                                        
Query: 646  ttagtcagaggtgcagcacaggtggaaaaagaattgttaacacctgattttgattctgtt 705
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1348 ttagtcagaggtgcagcacaggtggaaaaagaattgttaacacctgattttgattctgtt 1289

                                                                        
Query: 706  gatgagggtgaattcgttactactgaatcattgtttttgtttttgactaacgagttgcaa 765
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1288 gatgagggtgaattcgttactactgaatcattgtttttgtttttgactaacgagttgcaa 1229

                                                                        
Query: 766  ccgaacttaangttcatggtgagccatcaatatgcatcacatgtnccttaaaattttatt 825
            |||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||| |
Sbjct: 1228 ccgaacttaaggttcatggtgagccatcaatatgcatcacatgt-ccttagaattttaat 1170

                                                                        
Query: 826  cttagtgctatcgtcaaagactttaccaagtactgtacagaacaattcaacattacgttc 885
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1169 cttagtgctatcgtcaaagactttaccaagtactgtacagaacaattcaacattacgttc 1110

                                      
Query: 886  caagaaagtcttagattgcacgtaag 911
            |||| |||||| ||||||||||||||
Sbjct: 1109 caag-aagtctaagattgcacgtaag 1085


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7283
Number of Sequences: 1807
Number of extensions: 7283
Number of successful extensions: 66
Number of sequences better than 1.0e-20: 1
length of query: 911
length of database: 10,358,551
effective HSP length: 16
effective length of query: 895
effective length of database: 10,329,639
effective search space: 9245026905
effective search space used: 9245026905
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)