BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC17ZA04RM1.SCF screened BAC_end (911 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1789 1624 0.0 >3x_Contig1789 Length = 30977 Score = 1624 bits (819), Expect = 0.0 Identities = 856/866 (98%), Gaps = 2/866 (0%) Strand = Plus / Minus Query: 46 taaagaagcaggacatagttagatcccatgcgatgagcttcaaactagaacagaatactt 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1948 taaagaagcaggacatagttagatcccatgcgatgagcttcaaactagaacagaatactt 1889 Query: 106 gctggtttcaggcgtttcatctctggtttttgctattttaaataattttgaactttaatt 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1888 gctggtttcaggcgtttcatctctggtttttgctattttaaataattttgaactttaatt 1829 Query: 166 cgatacgtgctctaaaaaaaggctaggaactgtaatatcatggctagagtaagaggtaga 225 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1828 cgatacgtgctctaaaaacaggctaggaactgtaatatcatggctagagtaagaggtaga 1769 Query: 226 aagctaataaaaaagctcaagaaagatgagttccatccagaagacaataaaacccatgat 285 |||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1768 aagctaataacacagctcaagacagatgagttccatccagaagacaataaaacccatgat 1709 Query: 286 gagcctacggttagccatgttaatgaaactgctgggggtgacaatagtgatgtgagtcct 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1708 gagcctacggttagccatgttaatgaaactgctgggggtgacaatagtgatgtgagtcct 1649 Query: 346 aatactttctttggtgtcctagattctggcgaattggattattttaagaaggctgaatcc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1648 aatactttctttggtgtcctagattctggcgaattggattattttaagaaggctgaatcc 1589 Query: 406 acgttggctattgatacatttgagaatccagatgagaagtaccagtttatcaacagtgtc 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1588 acgttggctattgatacatttgagaatccagatgagaagtaccagtttatcaacagtgtc 1529 Query: 466 atcgaggaaagtaagggtaaagagttgaaacttgctacgtctcagatttcttctaagcta 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1528 atcgaggaaagtaagggtaaagagttgaaacttgctacgtctcagatttcttctaagcta 1469 Query: 526 atggaacgtattattatggaaagtgatgaaactcaattgaagactatcttcaaagctttc 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1468 atggaacgtattattatggaaagtgatgaaactcaattgaagactatcttcaaagctttc 1409 Query: 586 aatgggttttatttcaaccttgcatgtcacaaatattcctcccatgttttagagactcta 645 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1408 aatgggttttatttcaaccttgcatgtcacaaatattcctcccatgttttagagactcta 1349 Query: 646 ttagtcagaggtgcagcacaggtggaaaaagaattgttaacacctgattttgattctgtt 705 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1348 ttagtcagaggtgcagcacaggtggaaaaagaattgttaacacctgattttgattctgtt 1289 Query: 706 gatgagggtgaattcgttactactgaatcattgtttttgtttttgactaacgagttgcaa 765 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1288 gatgagggtgaattcgttactactgaatcattgtttttgtttttgactaacgagttgcaa 1229 Query: 766 ccgaacttaangttcatggtgagccatcaatatgcatcacatgtnccttaaaattttatt 825 |||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||| | Sbjct: 1228 ccgaacttaaggttcatggtgagccatcaatatgcatcacatgt-ccttagaattttaat 1170 Query: 826 cttagtgctatcgtcaaagactttaccaagtactgtacagaacaattcaacattacgttc 885 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1169 cttagtgctatcgtcaaagactttaccaagtactgtacagaacaattcaacattacgttc 1110 Query: 886 caagaaagtcttagattgcacgtaag 911 |||| |||||| |||||||||||||| Sbjct: 1109 caag-aagtctaagattgcacgtaag 1085 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7283 Number of Sequences: 1807 Number of extensions: 7283 Number of successful extensions: 66 Number of sequences better than 1.0e-20: 1 length of query: 911 length of database: 10,358,551 effective HSP length: 16 effective length of query: 895 effective length of database: 10,329,639 effective search space: 9245026905 effective search space used: 9245026905 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)