BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC17ZA08FM1.SCF screened BAC_end (952 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1219 1544 0.0 >3x_Contig1219 Length = 5018 Score = 1544 bits (779), Expect = 0.0 Identities = 838/852 (98%), Gaps = 6/852 (0%) Strand = Plus / Minus Query: 86 taaagatttcacagaagtactatgaaatggcagctttgaccaatggacattctgtatcca 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4969 taaagatttcacagaagtactatgaaatggcagctttgaccaatggacattctgtatcca 4910 Query: 146 tgtacaagctcgggatgttctatttgaaaggactgagaacgaaatctggtgaaatcgtta 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4909 tgtacaagctcgggatgttctatttgaaaggactgagaacgaaatctggtgaaatcgtta 4850 Query: 206 tcaaaagagaccctgttcaagctttatactggtttagaatggctaccaaggagatcgaaa 265 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4849 tcaaaagagaccctgtacaagctttatactggtttagaatggctaccaaggagatcgaaa 4790 Query: 266 tcccacgagacgataaggctcatgtagaactggaatcagtatcgccacaagcgatggttg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4789 tcccacgagacgataaggctcatgtagaactggaatcagtatcgccacaagcgatggttg 4730 Query: 326 agttgggtaagatttacggatttgaagagttagacgaatccgttagacaagagcttctga 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4729 agttgggtaagatttacggatttgaagagttagacgaatccgttagacaagagcttctga 4670 Query: 386 gaaacggaatcactcaagataaggaaaaatcgatcaaatactattatagatgcgcccatg 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4669 gaaacggaatcactcaagataaggaaaaatcgatcaaatactattatagatgcgcccatg 4610 Query: 446 acttcgattattctcaagcccaatacaaattgggtcatttttatgaatttggggagatgg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4609 acttcgattattctcaagcccaatacaaattgggtcatttttatgaatttggggagatgg 4550 Query: 506 gactacctgtaatacccaagaagtccattgcatggtacgcaaagagttccatgaacaaga 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4549 gactacctgtaatacccaagaagtccattgcatggtacgcaaagagttccatgaacaaga 4490 Query: 566 ccaaaccaaacccgttagccatggtagcacttagtggctggtaccttaccggtgctgagg 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4489 ccaaaccaaacccgttagccatggtagcacttagtggctggtaccttaccggtgctgagg 4430 Query: 626 ggatattgaaaccgaacgacgtagaggccttcaagtgggtgtcacgtgcttcgaaattat 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4429 ggatattgaaaccgaacgacgtagaggccttcaagtgggtgtcacgtgcttcgaaattat 4370 Query: 686 ctgacgggaaattaccaagagcagagtatgcattagcattttacttggagaaaggccttg 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4369 ctgacgggaaattaccaagagcagagtatgcattagcattttacttggagaaaggccttg 4310 Query: 746 gatgtcagccaaacatacaagaggccaaggtacaccacgaaactgctgctcgtcttggcc 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4309 gatgtcagccaaacatacaagaggccaaggtacaccacgaaactgctgctcgtcttggcc 4250 Query: 806 atccgaaagccatcgagcctttgag--aaatgtgaccttgncggttta-ttttactgttc 862 ||||||||||||||||| | ||||| ||||||||||||| | |||| ||||||||| | Sbjct: 4249 atccgaaagccatcgaggccttgaggaaaatgtgaccttgcggttttatttttactgtcc 4190 Query: 863 tgcgtagctagcttcattgtaatga-atgtaataataagatttgtnttaga-tagttagt 920 ||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||| Sbjct: 4189 tgcgtagctagcttcattgtaatgatatgtaataataagatttg-gttagagtagttagt 4131 Query: 921 tattggtattct 932 |||||||||||| Sbjct: 4130 tattggtattct 4119 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5564 Number of Sequences: 1807 Number of extensions: 5564 Number of successful extensions: 29 Number of sequences better than 1.0e-20: 1 length of query: 952 length of database: 10,358,551 effective HSP length: 16 effective length of query: 936 effective length of database: 10,329,639 effective search space: 9668542104 effective search space used: 9668542104 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)