BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC17ZB08FM1.SCF screened BAC_end (960 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1706 1653 0.0 >3x_Contig1706 Length = 16303 Score = 1653 bits (834), Expect = 0.0 Identities = 856/864 (99%) Strand = Plus / Plus Query: 86 aatagcagattcaaaaatatctcttttttgctctttagtgatatcagctttgagtgccac 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10324 aatagcagattcaaaaatatctcttttttgctctttagtgatatcagctttgagtgccac 10383 Query: 146 atccagatatatatcccaaatagacttcgatacgcttggaggaaaaatctcaacactcct 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10384 atccagatatatatcccaaatagacttcgatacgcttggaggaaaaatctcaacactcct 10443 Query: 206 ttcgaaaacagccaaagcttctgcttgatggccagaagattcatttaataacgcataatt 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10444 ttcgaaaacagccaaagcttctgcttgatggccagaagattcatttaataacgcataatt 10503 Query: 266 aataaacatggctggtgttgctgccttgatgagtattgctgtttcatacgcatttacagc 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10504 aataaacatggctggtgttgctgccttgatgagtattgctgtttcatacgcatttacagc 10563 Query: 326 tgtaccatagtttcctttgacctccaataagtcaaggtacattgcccataagcgtttaga 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10564 tgtaccatagtttcctttgacctccaataagtcaaggtacattgcccataagcgtttaga 10623 Query: 386 tgagaaaattgctgcttgtgctggcgattctcctttctcaaatttttgtaggagtaattc 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10624 tgagaaaattgctgcttgtgctggcgattctcctttctcaaatttttgtaggagtaattc 10683 Query: 446 atgattatctggtatttctaatacaacggacaaaacttttatggcatcgtcaatgcttct 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10684 atgattatctggtatttctaatacaacggacaaaacttttatggcatcgtcaatgcttct 10743 Query: 506 ttttagtctgtattcacaccaatataaccaaacattttcaagatctactaaaaatttgaa 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10744 ttttagtctgtattcacaccaatataaccaaacattttcaagatctactaaaaatttgaa 10803 Query: 566 agggacgttagtggctttgtccagcaagacctcggatttttcaatatcctcttcaaaaag 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10804 agggacgttagtggctttgtccagcaagacctcggatttttcaatatcctcttcaaaaag 10863 Query: 626 tctgcaatattgacaccataattctcctaatagccctggagtagtctgaagtctatagtc 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10864 tctgcaatattgacaccataattctcctaatagccctggagtagtctgaagtctatagtc 10923 Query: 686 cacggtaagaacagcatctgcataaactttagctttatcagagatggtatcaaaaagctt 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10924 cacggtaagaacagcatctgcataaactttagctttatcagagatggtatcaaaaagctt 10983 Query: 746 cactcgttctagccacaatttgatgttgttgggttctcgcctcatttctaagtcgtttaa 805 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 10984 cactcgttctagccacaatttgatgttgttgggttctcgcctcaattctaagtcgtttaa 11043 Query: 806 tctaatagtgtggntttttataaatgaggttagagtgttcgcatgtagtcttatatttgc 865 ||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 11044 tctaatagtgtggttttttattaatgaggttagagtgtcggcatgtagtcttatatttgc 11103 Query: 866 gaacagccgttgcttttctgaattatcgnctttcatcttttgaaataattcttgggtcaa 925 |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 11104 gaacagccgttgcttttctgaattatcgtctttcatcttttgaattaattcttgggtcaa 11163 Query: 926 tagctcctccatacgattccaaaa 949 |||||||||||||||| ||||||| Sbjct: 11164 tagctcctccatacgaatccaaaa 11187 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6841 Number of Sequences: 1807 Number of extensions: 6841 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 960 length of database: 10,358,551 effective HSP length: 16 effective length of query: 944 effective length of database: 10,329,639 effective search space: 9751179216 effective search space used: 9751179216 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)