BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC17ZB08FM1.SCF screened BAC_end
         (960 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1706                                                        1653   0.0  

>3x_Contig1706 
          Length = 16303

 Score = 1653 bits (834), Expect = 0.0
 Identities = 856/864 (99%)
 Strand = Plus / Plus

                                                                         
Query: 86    aatagcagattcaaaaatatctcttttttgctctttagtgatatcagctttgagtgccac 145
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10324 aatagcagattcaaaaatatctcttttttgctctttagtgatatcagctttgagtgccac 10383

                                                                         
Query: 146   atccagatatatatcccaaatagacttcgatacgcttggaggaaaaatctcaacactcct 205
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10384 atccagatatatatcccaaatagacttcgatacgcttggaggaaaaatctcaacactcct 10443

                                                                         
Query: 206   ttcgaaaacagccaaagcttctgcttgatggccagaagattcatttaataacgcataatt 265
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10444 ttcgaaaacagccaaagcttctgcttgatggccagaagattcatttaataacgcataatt 10503

                                                                         
Query: 266   aataaacatggctggtgttgctgccttgatgagtattgctgtttcatacgcatttacagc 325
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10504 aataaacatggctggtgttgctgccttgatgagtattgctgtttcatacgcatttacagc 10563

                                                                         
Query: 326   tgtaccatagtttcctttgacctccaataagtcaaggtacattgcccataagcgtttaga 385
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10564 tgtaccatagtttcctttgacctccaataagtcaaggtacattgcccataagcgtttaga 10623

                                                                         
Query: 386   tgagaaaattgctgcttgtgctggcgattctcctttctcaaatttttgtaggagtaattc 445
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10624 tgagaaaattgctgcttgtgctggcgattctcctttctcaaatttttgtaggagtaattc 10683

                                                                         
Query: 446   atgattatctggtatttctaatacaacggacaaaacttttatggcatcgtcaatgcttct 505
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10684 atgattatctggtatttctaatacaacggacaaaacttttatggcatcgtcaatgcttct 10743

                                                                         
Query: 506   ttttagtctgtattcacaccaatataaccaaacattttcaagatctactaaaaatttgaa 565
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10744 ttttagtctgtattcacaccaatataaccaaacattttcaagatctactaaaaatttgaa 10803

                                                                         
Query: 566   agggacgttagtggctttgtccagcaagacctcggatttttcaatatcctcttcaaaaag 625
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10804 agggacgttagtggctttgtccagcaagacctcggatttttcaatatcctcttcaaaaag 10863

                                                                         
Query: 626   tctgcaatattgacaccataattctcctaatagccctggagtagtctgaagtctatagtc 685
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10864 tctgcaatattgacaccataattctcctaatagccctggagtagtctgaagtctatagtc 10923

                                                                         
Query: 686   cacggtaagaacagcatctgcataaactttagctttatcagagatggtatcaaaaagctt 745
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10924 cacggtaagaacagcatctgcataaactttagctttatcagagatggtatcaaaaagctt 10983

                                                                         
Query: 746   cactcgttctagccacaatttgatgttgttgggttctcgcctcatttctaagtcgtttaa 805
             |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 10984 cactcgttctagccacaatttgatgttgttgggttctcgcctcaattctaagtcgtttaa 11043

                                                                         
Query: 806   tctaatagtgtggntttttataaatgaggttagagtgttcgcatgtagtcttatatttgc 865
             ||||||||||||| ||||||| ||||||||||||||||  ||||||||||||||||||||
Sbjct: 11044 tctaatagtgtggttttttattaatgaggttagagtgtcggcatgtagtcttatatttgc 11103

                                                                         
Query: 866   gaacagccgttgcttttctgaattatcgnctttcatcttttgaaataattcttgggtcaa 925
             |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 11104 gaacagccgttgcttttctgaattatcgtctttcatcttttgaattaattcttgggtcaa 11163

                                     
Query: 926   tagctcctccatacgattccaaaa 949
             |||||||||||||||| |||||||
Sbjct: 11164 tagctcctccatacgaatccaaaa 11187


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6841
Number of Sequences: 1807
Number of extensions: 6841
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 960
length of database: 10,358,551
effective HSP length: 16
effective length of query: 944
effective length of database: 10,329,639
effective search space: 9751179216
effective search space used: 9751179216
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)