BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC17ZC02FM1.SCF screened BAC_end (931 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig842 1340 0.0 >3x_Contig842 Length = 3899 Score = 1340 bits (676), Expect = 0.0 Identities = 686/688 (99%), Gaps = 1/688 (0%) Strand = Plus / Minus Query: 87 taatagatgatagtcttttggttaattgttgataattatacaaatgtatattcatatcct 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 688 taatagatgatagtcttttggttaattgttgataattatacaaatgtatattcatatcct 629 Query: 147 tgtccaagttttcttccaaaattagaagcatttgatacaagtctacgaatttcttgtacc 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 628 tgtccaagttttcttccaaaattagaagcatttgatacaagtctacgaatttcttgtacc 569 Query: 207 ggttgtcaattattttccagttattaattataacaacaaaagttcagtggaatacgttga 266 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 568 ggttgtcaattagtttccagttattaattataacaacaaaagttcagtggaatacgttga 509 Query: 267 tctctcacgaatatcagtaccatatattaagttaaaaaatgtctgaagagaataagaata 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 508 tctctcacgaatatcagtaccatatattaagttaaaaaatgtctgaagagaataagaata 449 Query: 327 ctgaaaatgttcctaaaccaccaactgcctctgtattttctatgtttggtggtaagaaac 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 ctgaaaatgttcctaaaccaccaactgcctctgtattttctatgtttggtggtaagaaac 389 Query: 387 cagaagtgaagaaggaagaaccagaagtgaagaaggaagaagaagaatctggcaaggctg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 cagaagtgaagaaggaagaaccagaagtgaagaaggaagaagaagaatctggcaaggctg 329 Query: 447 aaactgaaacgacaggaaaggacgaagaggatgctccagagtcccctgacgtgcactttg 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 328 aaactgaaacgacaggaaaggacgaagaggatgctccagagtcccctgacgtgcactttg 269 Query: 507 agccagtcgttacgttggaaaaagttgacgtgaagactaacgaagaaaacgaggaggttc 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 agccagtcgttacgttggaaaaagttgacgtgaagactaacgaagaaaacgaggaggttc 209 Query: 567 tattcaaggtcagagccaagctatttagatttgatggtgaagctaaagaatggaaagaaa 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 tattcaaggtcagagccaagctatttagatttgatggtgaagctaaagaatggaaagaaa 149 Query: 627 gaggtactggtgatgttaagttcttgcaacacaaggaaactaagaaggtcagacttttga 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 gaggtactggtgatgttaagttcttgcaacacaaggaaactaagaaggtcagacttttga 89 Query: 687 tgagaagagacaagaccttgaaggtatgtgctaaccatataatcgccccagaatacgtct 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88 tgagaagagacaagaccttgaaggtatgtgctaaccatataatcgccccagaatacgtct 29 Query: 747 tgaagc-caaatgttggttctgatagat 773 |||||| ||||||||||||||||||||| Sbjct: 28 tgaagcacaaatgttggttctgatagat 1 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8401 Number of Sequences: 1807 Number of extensions: 8401 Number of successful extensions: 72 Number of sequences better than 1.0e-20: 1 length of query: 931 length of database: 10,358,551 effective HSP length: 16 effective length of query: 915 effective length of database: 10,329,639 effective search space: 9451619685 effective search space used: 9451619685 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)