BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC17ZC08FM1.SCF screened BAC_end (928 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1804 1570 0.0 >3x_Contig1804 Length = 51183 Score = 1570 bits (792), Expect = 0.0 Identities = 828/841 (98%) Strand = Plus / Minus Query: 88 aatgcatggatttcaaatcctaaatttatataacaatttaatacatcttggacaccatta 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14725 aatgcatggatttcaaatcctaaatttatataacaatttaatacatcttggacaccatta 14666 Query: 148 catattttaggcaaggtgataagagcatgtcatttcaaaatcattcaattaaaagtttgg 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14665 catattttaggcaaggtgataagagcatgtcatttcaaaatcattcaattaaaagtttgg 14606 Query: 208 gtaaaagtaactttcttagtgacggggtttatctaaaatctatatgtgcatgcgtttgtg 267 ||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14605 gtaaaagtaacatacgtagtgacggggtttatctaaaatctatatgtgcatgcgtttgtg 14546 Query: 268 cttgtattacattagaaacggaattaaagttcatttttaaatttatgcttttctaagata 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14545 cttgtattacattagaaacggaattaaagttcatttttaaatttatgcttttctaagata 14486 Query: 328 agaacactcactttagaaaacatcaccttggtgcaacatagcatcagcaactctgatgaa 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14485 agaacactcactttagaaaacatcaccttggtgcaacatagcatcagcaactctgatgaa 14426 Query: 388 accagtcaagttagcacccttaaccaaagatggcaaagcttcaacgttagattcgttaga 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14425 accagtcaagttagcacccttaaccaaagatggcaaagcttcaacgttagattcgttaga 14366 Query: 448 atattcctttgcagtagtaacacagtcatcgaaacaagtagtcatgatcttcttcaattc 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14365 atattcctttgcagtagtaacacagtcatcgaaacaagtagtcatgatcttcttcaattc 14306 Query: 508 agcgtcaactgtttctctggtccatgaaactctagcggagttttgagccatttccaaacc 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14305 agcgtcaactgtttctctggtccatgaaactctagcggagttttgagccatttccaaacc 14246 Query: 568 agaaacagcaacaccacccatgttagaagccttacctggagcgtaccagacggcaggagc 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14245 agaaacagcaacaccacccatgttagaagccttacctggagcgtaccagacggcaggagc 14186 Query: 628 actagcggaggcagtttgcaaacgaacaccttcgaagacatcgatggcttcttgagtgga 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14185 actagcggaggcagtttgcaaacgaacaccttcgaagacatcgatggcttcttgagtgga 14126 Query: 688 acccatattagaaccttcagcaacgaacttgacaccattggcaaccaagtgttcagcttc 747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14125 acccatattagaaccttcagcaacgaacttgacaccattggcaaccaagtgttcagcttc 14066 Query: 748 agcaccagaaacttcgttttgagtggcacatggcanagcaacatcaaccttacctacgtg 807 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 14065 agcaccagaaacttcgttttgagtggcacatggcaaagcaacatcaaccttacctacgtg 14006 Query: 808 aacccatggtctagcaccagcgatgtatttcacagaactttcagagaagacagaagcttt 867 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 14005 aacccatggtctagcaccagcgatgtatttcacagaacttccagagaagacagaagcttc 13946 Query: 868 accaacgatttgttccanagtcttttcagctgctctaccattttgnatagcgtagatgtg 927 ||||||||||||||||| |||||| ||||||||||||| ||| |||||||||||||| Sbjct: 13945 accaacgatttgttccaaagtcttccaggctgctctaccatcttggatagcgtagatgtg 13886 Query: 928 c 928 | Sbjct: 13885 c 13885 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6345 Number of Sequences: 1807 Number of extensions: 6345 Number of successful extensions: 37 Number of sequences better than 1.0e-20: 1 length of query: 928 length of database: 10,358,551 effective HSP length: 16 effective length of query: 912 effective length of database: 10,329,639 effective search space: 9420630768 effective search space used: 9420630768 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)