BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC17ZC11FM1.SCF screened BAC_end
         (918 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1716                                                        1467   0.0  

>3x_Contig1716 
          Length = 19108

 Score = 1467 bits (740), Expect = 0.0
 Identities = 815/834 (97%), Gaps = 5/834 (0%)
 Strand = Plus / Minus

                                                                         
Query: 86    tactctcatcatccgccagtttgaattgggacacattagattcatcgttgtgaaagaatt 145
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16559 tactctcatcatccgccagtttgaattgggacacattagattcatcgttgtgaaagaatt 16500

                                                                         
Query: 146   tggaaccatctttacaaatcactaggttccagtagtttcgtagaggtaaacagaacactg 205
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16499 tggaaccatctttacaaatcactaggttccagtagtttcgtagaggtaaacagaacactg 16440

                                                                         
Query: 206   gcactctcatttttcttttaccagcttgctggcttccgaactcttttggtttttcctttg 265
             ||||||||| ||   |  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16439 gcactctcaattccttcataccagcttgctggcttccgaactcttttggtttttcctttg 16380

                                                                         
Query: 266   tggataccttggacctcgtattgaagtagtagaaattccccgaaggatctttaaatcgct 325
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16379 tggataccttggacctcgtattgaagtagtagaaattccccgaaggatctttaaatcgct 16320

                                                                         
Query: 326   tccattcgctcatacttgattcagataggaacaatgggctctccgccaatttagttaaaa 385
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16319 tccattcgctcatacttgattcagataggaacaatgggctctccgccaatttagttaaaa 16260

                                                                         
Query: 386   ctttaaaactttactttcacagacaggtgcagcaatgcaaataacatctctgagacaggt 445
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16259 ctttaaaactttactttcacagacaggtgcagcaatgcaaataacatctctgagacaggt 16200

                                                                         
Query: 446   cttccacctcgtacactgggttgttctcactaagaaaatccattgaagagccgttaaaca 505
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16199 cttccacctcgtacactgggttgttctcactaagaaaatccattgaagagccgttaaaca 16140

                                                                         
Query: 506   aaggttcgttcttttattttttttttaatgtcgacctttaaaatgaaataaaatacaatc 565
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16139 aaggttcgttcttttattttttttttaatgtcgacctttaaaatgaaataaaatacaatc 16080

                                                                         
Query: 566   aaagttagaagaaatccagtggcaaacctttgaaactagagattgaacagcaattggatt 625
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16079 aaagttagaagaaatccagtggcaaacctttgaaactagagattgaacagcaattggatt 16020

                                                                         
Query: 626   caaccagatagttaaacttgtagctaaagttcatcgaaagtagcagcaagagcatttctg 685
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16019 caaccagatagttaaacttgtagctaaagttcatcgaaagtagcagcaagagcatttctg 15960

                                                                         
Query: 686   tgagcgtacaggtaattggtctgtgagaatat-aagaac-actaagaagtcagaacagat 743
             |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 15959 tgagcgtacaggtaattggtctgtgagaatataaagaacaactaagaagtcagaacagat 15900

                                                                         
Query: 744   ggggtccagaagatacgattcgagaac-accattttctcgccagagggaagattatacca 802
             ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 15899 ggggtccagaagatacgattcgagaacaaccattttctcgccagagggaagattatacca 15840

                                                                         
Query: 803   ggttgaatacgctttanaat-catttcacatgctggtactgcgatgggtatcatgacttg 861
             |||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||  
Sbjct: 15839 ggttgaatacgctttagaatccatttcacatgctggtactgcgattggtatcatgactga 15780

                                                                   
Query: 862   acagggtattgtattagcagcttgaagaaaa-tgacatcgnaactattagaaca 914
             ||| ||||||||||||||||||  ||||||| |||||||| |||||||||||||
Sbjct: 15779 acaaggtattgtattagcagctgaaagaaaagtgacatcgaaactattagaaca 15726


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8171
Number of Sequences: 1807
Number of extensions: 8171
Number of successful extensions: 136
Number of sequences better than 1.0e-20: 1
length of query: 918
length of database: 10,358,551
effective HSP length: 16
effective length of query: 902
effective length of database: 10,329,639
effective search space: 9317334378
effective search space used: 9317334378
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)