BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC17ZC12RM1.SCF screened BAC_end (958 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1708 1475 0.0 >3x_Contig1708 Length = 19451 Score = 1475 bits (744), Expect = 0.0 Identities = 809/827 (97%), Gaps = 3/827 (0%) Strand = Plus / Plus Query: 48 tgaatgttttcattgtttactttttgttctacgatgtaaacacaaaaaaa-aagattacc 106 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 7544 tgaatgttttcattgtttacgttttgttctacgatgtaaacacaaaaaaacaagattacc 7603 Query: 107 cggatcatatttagtactacatttaattcaaatgaggtaagttggacatgtaatgggcaa 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7604 cggatcatatttagtactacatttaattcaaatgaggtaagttggacatgtaatgggcaa 7663 Query: 167 tttgatgttatccaacccttcgttcattctaaatagcggtgttaatgcttattgtagctt 226 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 7664 tttgatgttatccaacccttcgttcattctaaatagcggtgttaatgcttagcgtagctt 7723 Query: 227 gtatagatcaatctcccctgatacaagtcggttttttctagttttcttcctttatttcaa 286 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 7724 gtatagatcaatctcccctgatacaagtcggttttctcgagttttcttcctttatttcaa 7783 Query: 287 tatcggaataatatgaaatcacgactttgaactaatctctacaatgtgaattctttcaaa 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7784 tatcggaataatatgaaatcacgactttgaactaatctctacaatgtgaattctttcaaa 7843 Query: 347 gactagaagaaccaagaattatcagctaagatagacacttctcggagcgagttggatgat 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7844 gactagaagaaccaagaattatcagctaagatagacacttctcggagcgagttggatgat 7903 Query: 407 atattctagctgaagagtaagaggtttgggtcacctgaaaaaaagttgtcagtatggcat 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7904 atattctagctgaagagtaagaggtttgggtcacctgaaaaaaagttgtcagtatggcat 7963 Query: 467 ttgaaaccgagatcgagactaagagaagagaattgaattatttgaagcatgtttctgcat 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7964 ttgaaaccgagatcgagactaagagaagagaattgaattatttgaagcatgtttctgcat 8023 Query: 527 tgacacagaaattaaaggctcaattggacgagctgagcgttcaggtagcgcagatgaata 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8024 tgacacagaaattaaaggctcaattggacgagctgagcgttcaggtagcgcagatgaata 8083 Query: 587 gcaatgctgtgactgttaaagacgtaatggctaattgggactcggttcttcggtctatct 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8084 gcaatgctgtgactgttaaagacgtaatggctaattgggactcggttcttcggtctatct 8143 Query: 647 ctcangcttcgatatctttacttcagtatacagaaaacgactatgagactgggaaatggg 706 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8144 ctcaggcttcgatatctttacttcagtatacagaaaacgactatgagactgggaaatggg 8203 Query: 707 ccagtaaagaggaacatagaaaccaacaggtgcgctgaagatgaaagtgctgcgtcagat 766 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 8204 ccagtaaagaggaacatagaaaccaacagg-gcgctgaagatgaaagtgctgcgtcagaa 8262 Query: 767 agttcagaagataaccagcagcggcaacaggatcaattaccttcgctttcggtaactttt 826 |||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||| ||| Sbjct: 8263 agttcagaagataaccagcagcggcaacaggatcaattacctccgcttccggaaac-ttt 8321 Query: 827 ggtaccgttgaaagtttcaaatgacgttgaattacgtttttattgaa 873 ||||| | |||||||| || |||||||||||| |||||||||||||| Sbjct: 8322 ggtacgggtgaaagttgcagatgacgttgaataacgtttttattgaa 8368 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8806 Number of Sequences: 1807 Number of extensions: 8806 Number of successful extensions: 62 Number of sequences better than 1.0e-20: 1 length of query: 958 length of database: 10,358,551 effective HSP length: 16 effective length of query: 942 effective length of database: 10,329,639 effective search space: 9730519938 effective search space used: 9730519938 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)