BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC17ZC12RM1.SCF screened BAC_end
         (958 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1708                                                        1475   0.0  

>3x_Contig1708 
          Length = 19451

 Score = 1475 bits (744), Expect = 0.0
 Identities = 809/827 (97%), Gaps = 3/827 (0%)
 Strand = Plus / Plus

                                                                        
Query: 48   tgaatgttttcattgtttactttttgttctacgatgtaaacacaaaaaaa-aagattacc 106
            |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 7544 tgaatgttttcattgtttacgttttgttctacgatgtaaacacaaaaaaacaagattacc 7603

                                                                        
Query: 107  cggatcatatttagtactacatttaattcaaatgaggtaagttggacatgtaatgggcaa 166
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7604 cggatcatatttagtactacatttaattcaaatgaggtaagttggacatgtaatgggcaa 7663

                                                                        
Query: 167  tttgatgttatccaacccttcgttcattctaaatagcggtgttaatgcttattgtagctt 226
            |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||
Sbjct: 7664 tttgatgttatccaacccttcgttcattctaaatagcggtgttaatgcttagcgtagctt 7723

                                                                        
Query: 227  gtatagatcaatctcccctgatacaagtcggttttttctagttttcttcctttatttcaa 286
            ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 7724 gtatagatcaatctcccctgatacaagtcggttttctcgagttttcttcctttatttcaa 7783

                                                                        
Query: 287  tatcggaataatatgaaatcacgactttgaactaatctctacaatgtgaattctttcaaa 346
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7784 tatcggaataatatgaaatcacgactttgaactaatctctacaatgtgaattctttcaaa 7843

                                                                        
Query: 347  gactagaagaaccaagaattatcagctaagatagacacttctcggagcgagttggatgat 406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7844 gactagaagaaccaagaattatcagctaagatagacacttctcggagcgagttggatgat 7903

                                                                        
Query: 407  atattctagctgaagagtaagaggtttgggtcacctgaaaaaaagttgtcagtatggcat 466
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7904 atattctagctgaagagtaagaggtttgggtcacctgaaaaaaagttgtcagtatggcat 7963

                                                                        
Query: 467  ttgaaaccgagatcgagactaagagaagagaattgaattatttgaagcatgtttctgcat 526
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7964 ttgaaaccgagatcgagactaagagaagagaattgaattatttgaagcatgtttctgcat 8023

                                                                        
Query: 527  tgacacagaaattaaaggctcaattggacgagctgagcgttcaggtagcgcagatgaata 586
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8024 tgacacagaaattaaaggctcaattggacgagctgagcgttcaggtagcgcagatgaata 8083

                                                                        
Query: 587  gcaatgctgtgactgttaaagacgtaatggctaattgggactcggttcttcggtctatct 646
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8084 gcaatgctgtgactgttaaagacgtaatggctaattgggactcggttcttcggtctatct 8143

                                                                        
Query: 647  ctcangcttcgatatctttacttcagtatacagaaaacgactatgagactgggaaatggg 706
            |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8144 ctcaggcttcgatatctttacttcagtatacagaaaacgactatgagactgggaaatggg 8203

                                                                        
Query: 707  ccagtaaagaggaacatagaaaccaacaggtgcgctgaagatgaaagtgctgcgtcagat 766
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| 
Sbjct: 8204 ccagtaaagaggaacatagaaaccaacagg-gcgctgaagatgaaagtgctgcgtcagaa 8262

                                                                        
Query: 767  agttcagaagataaccagcagcggcaacaggatcaattaccttcgctttcggtaactttt 826
            |||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||| |||
Sbjct: 8263 agttcagaagataaccagcagcggcaacaggatcaattacctccgcttccggaaac-ttt 8321

                                                           
Query: 827  ggtaccgttgaaagtttcaaatgacgttgaattacgtttttattgaa 873
            ||||| | |||||||| || |||||||||||| ||||||||||||||
Sbjct: 8322 ggtacgggtgaaagttgcagatgacgttgaataacgtttttattgaa 8368


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8806
Number of Sequences: 1807
Number of extensions: 8806
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 1
length of query: 958
length of database: 10,358,551
effective HSP length: 16
effective length of query: 942
effective length of database: 10,329,639
effective search space: 9730519938
effective search space used: 9730519938
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)