BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC17ZD01FM1.SCF screened BAC_end (930 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1471 1576 0.0 >3x_Contig1471 Length = 8032 Score = 1576 bits (795), Expect = 0.0 Identities = 834/842 (99%), Gaps = 5/842 (0%) Strand = Plus / Plus Query: 87 tctcttcttggagataatggcaaccatttttactttatttgttcgtcggggagctcgaaa 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2695 tctcttcttggagataatggcaaccatttttactttatttgttcgtcggggagctcgaaa 2754 Query: 147 ttataggtgataataaaactaactaaagtaagtatcttgtatgtccaatggcacttatgt 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2755 ttataggtgataataaaactaactaaagtaagtatcttgtatgtccaatggcacttatgt 2814 Query: 207 tcataatgaaccagattgtaaagcgatgatgagaacaatattcgtcaaaccgtccgaatc 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2815 tcataatgaaccagattgtaaagcgatgatgagaacaatattcgtcaaaccgtccgaatc 2874 Query: 267 gctgcgattggtatggtgaaaatgaaaaaatcatctgaaagacagtatttactcaccaac 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2875 gctgcgattggtatggtgaaaatgaaaaaatcatctgaaagacagtatttactcaccaac 2934 Query: 327 acatgtggtgtatgggttaatgcttcagataaatgaacattttcaatgagataagtaccc 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2935 acatgtggtgtatgggttaatgcttcagataaatgaacattttcaatgagataagtaccc 2994 Query: 387 aaaatggcaatgcagaaaaaattggaaaaaaaactaaaacaaaaatgtccgggtgagcag 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2995 aaaatggcaatgcagaaaaaattggaaaaaaaactaaaacaaaaatgtccgggtgagcag 3054 Query: 447 tcccaggaacatatattttcaagtcacctggtaagcgtagaaaactcgccgtaaacagaa 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3055 tcccaggaacatatattttcaagtcacctggtaagcgtagaaaactcgccgtaaacagaa 3114 Query: 507 aacttcaagaccgttcctccatttcctaatggggaagttcctaaataggatttatacgcg 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3115 aacttcaagaccgttcctccatttcctaatggggaagttcctaaataggatttatacgcg 3174 Query: 567 agatgttccaccccctgcattggtttatgtgaatactcgagagccttgtggtaactcgca 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3175 agatgttccaccccctgcattggtttatgtgaatactcgagagccttgtggtaactcgca 3234 Query: 627 tcacttaggaaacagacaacacaattgtttcaacgaataataaaatgggaaataacatag 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3235 tcacttaggaaacagacaacacaattgtttcaacgaataataaaatgggaaataacatag 3294 Query: 687 gaattccagacaatgttgcaatcacggcgtgtcacagctgcatacttgttattccgaaaa 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3295 gaattccagacaatgttgcaatcacggcgtgtcacagctgcatacttgttattccgaaaa 3354 Query: 747 gaaagtacgtcaatattgaccggggttttagcaggtatatgacccaatattgctttcggg 806 ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 3355 gaaagtacgtcaatattgacc-gggttttagcaggtatatgacccaatattgc-ttcggg 3412 Query: 807 taattacaggatgccgtntttcgttttctctctctctttctgtttctcacaatttgaacg 866 |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct: 3413 taattacaggatgccg--tttcgttttctctctctctctctgtttctcacaatttgaacg 3470 Query: 867 -aaaaaaagaattattttgggagccagtacacctgcagagggtacagcgagcacactcga 925 ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3471 aaaaaaaagaataatattgggagccagtacacctgcagagggtacagcgagcacactcga 3530 Query: 926 at 927 || Sbjct: 3531 at 3532 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7378 Number of Sequences: 1807 Number of extensions: 7378 Number of successful extensions: 80 Number of sequences better than 1.0e-20: 1 length of query: 930 length of database: 10,358,551 effective HSP length: 16 effective length of query: 914 effective length of database: 10,329,639 effective search space: 9441290046 effective search space used: 9441290046 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)