BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC17ZD03FM1.SCF screened BAC_end
         (1005 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1152                                                        1469   0.0  

>3x_Contig1152 
          Length = 5366

 Score = 1469 bits (741), Expect = 0.0
 Identities = 747/749 (99%)
 Strand = Plus / Plus

                                                                        
Query: 87   ataaacgaacaatcgcaagataaagtggagagtatcgaattatcaaacgctttgacaaga 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4610 ataaacgaacaatcgcaagataaagtggagagtatcgaattatcaaacgctttgacaaga 4669

                                                                        
Query: 147  ttgcaacaagaagacaaggtagtaatcttaggagaaggtctaagaagatcaattcgtttg 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4670 ttgcaacaagaagacaaggtagtaatcttaggagaaggtctaagaagatcaattcgtttg 4729

                                                                        
Query: 207  aatggccgtgtatgaatagatattatcaagtctagtttttctgagaaagcctctacatag 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4730 aatggccgtgtatgaatagatattatcaagtctagtttttctgagaaagcctctacatag 4789

                                                                        
Query: 267  tttgcaaagggctaaatgagaataacgaccttccgcatgttctgcttatatacatacgtt 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4790 tttgcaaagggctaaatgagaataacgaccttccgcatgttctgcttatatacatacgtt 4849

                                                                        
Query: 327  ctgtgtatatatcatcgtgaaagtgtttgacattataatagcatatttagttagagtagc 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4850 ctgtgtatatatcatcgtgaaagtgtttgacattataatagcatatttagttagagtagc 4909

                                                                        
Query: 387  ctaaagaaaggtcccccgagatccatctgttgatcatttccatagtagctagtggttgat 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4910 ctaaagaaaggtcccccgagatccatctgttgatcatttccatagtagctagtggttgat 4969

                                                                        
Query: 447  aatatggaaccgtatgacctgcttcgaatactctgaggaaagtaaagggtccgtggtttt 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4970 aatatggaaccgtatgacctgcttcgaatactctgaggaaagtaaagggtccgtggtttt 5029

                                                                        
Query: 507  tgacctcaccaaactggacggatccgttcaaactataccatgggtttaagggtaacgttt 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5030 tgacctcaccaaactggacggatccgttcaaactataccatgggtttaagggtaacgttt 5089

                                                                        
Query: 567  catagcttatatggtccttccatgtgagagcatcggtccacgccatattacccaaccaat 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5090 catagcttatatggtccttccatgtgagagcatcggtccacgccatattacccaaccaat 5149

                                                                        
Query: 627  tacatatgtagtctgtatcgccggcatatatcaagacaggaatgttcaaatcaagcagtt 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5150 tacatatgtagtctgtatcgccggcatatatcaagacaggaatgttcaaatcaagcagtt 5209

                                                                        
Query: 687  cggtcacatattgctggaatggcctgctattatcacccgtcaggaagaagtcgctcccaa 746
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5210 cggtcacatattgctggaatggcctgctattatcacccgtcaggaagaagtcgctcccaa 5269

                                                                        
Query: 747  ctgaagtattacatccgttatacgagctcactttcgtacctagagcgtcttgcacaaatt 806
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5270 ctgaagtattacatccgttatacgagctcactttcgtacctagagcgtcttgcacaaatt 5329

                                         
Query: 807  cttgttttaagtaagagcggatatatcct 835
            |||| || |||||||||||||||||||||
Sbjct: 5330 cttggttcaagtaagagcggatatatcct 5358


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5865
Number of Sequences: 1807
Number of extensions: 5865
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 1005
length of database: 10,358,551
effective HSP length: 16
effective length of query: 989
effective length of database: 10,329,639
effective search space: 10216012971
effective search space used: 10216012971
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)