BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC17ZD03FM1.SCF screened BAC_end (1005 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1152 1469 0.0 >3x_Contig1152 Length = 5366 Score = 1469 bits (741), Expect = 0.0 Identities = 747/749 (99%) Strand = Plus / Plus Query: 87 ataaacgaacaatcgcaagataaagtggagagtatcgaattatcaaacgctttgacaaga 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4610 ataaacgaacaatcgcaagataaagtggagagtatcgaattatcaaacgctttgacaaga 4669 Query: 147 ttgcaacaagaagacaaggtagtaatcttaggagaaggtctaagaagatcaattcgtttg 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4670 ttgcaacaagaagacaaggtagtaatcttaggagaaggtctaagaagatcaattcgtttg 4729 Query: 207 aatggccgtgtatgaatagatattatcaagtctagtttttctgagaaagcctctacatag 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4730 aatggccgtgtatgaatagatattatcaagtctagtttttctgagaaagcctctacatag 4789 Query: 267 tttgcaaagggctaaatgagaataacgaccttccgcatgttctgcttatatacatacgtt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4790 tttgcaaagggctaaatgagaataacgaccttccgcatgttctgcttatatacatacgtt 4849 Query: 327 ctgtgtatatatcatcgtgaaagtgtttgacattataatagcatatttagttagagtagc 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4850 ctgtgtatatatcatcgtgaaagtgtttgacattataatagcatatttagttagagtagc 4909 Query: 387 ctaaagaaaggtcccccgagatccatctgttgatcatttccatagtagctagtggttgat 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4910 ctaaagaaaggtcccccgagatccatctgttgatcatttccatagtagctagtggttgat 4969 Query: 447 aatatggaaccgtatgacctgcttcgaatactctgaggaaagtaaagggtccgtggtttt 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4970 aatatggaaccgtatgacctgcttcgaatactctgaggaaagtaaagggtccgtggtttt 5029 Query: 507 tgacctcaccaaactggacggatccgttcaaactataccatgggtttaagggtaacgttt 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5030 tgacctcaccaaactggacggatccgttcaaactataccatgggtttaagggtaacgttt 5089 Query: 567 catagcttatatggtccttccatgtgagagcatcggtccacgccatattacccaaccaat 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5090 catagcttatatggtccttccatgtgagagcatcggtccacgccatattacccaaccaat 5149 Query: 627 tacatatgtagtctgtatcgccggcatatatcaagacaggaatgttcaaatcaagcagtt 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5150 tacatatgtagtctgtatcgccggcatatatcaagacaggaatgttcaaatcaagcagtt 5209 Query: 687 cggtcacatattgctggaatggcctgctattatcacccgtcaggaagaagtcgctcccaa 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5210 cggtcacatattgctggaatggcctgctattatcacccgtcaggaagaagtcgctcccaa 5269 Query: 747 ctgaagtattacatccgttatacgagctcactttcgtacctagagcgtcttgcacaaatt 806 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5270 ctgaagtattacatccgttatacgagctcactttcgtacctagagcgtcttgcacaaatt 5329 Query: 807 cttgttttaagtaagagcggatatatcct 835 |||| || ||||||||||||||||||||| Sbjct: 5330 cttggttcaagtaagagcggatatatcct 5358 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5865 Number of Sequences: 1807 Number of extensions: 5865 Number of successful extensions: 34 Number of sequences better than 1.0e-20: 1 length of query: 1005 length of database: 10,358,551 effective HSP length: 16 effective length of query: 989 effective length of database: 10,329,639 effective search space: 10216012971 effective search space used: 10216012971 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)