BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC17ZD03RM1.SCF screened BAC_end (939 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1774 1631 0.0 >3x_Contig1774 Length = 27771 Score = 1631 bits (823), Expect = 0.0 Identities = 884/897 (98%), Gaps = 6/897 (0%) Strand = Plus / Minus Query: 43 gcttatcaaatgatttttaagatataaaggnagaccaaaataataataccaaacaaaccc 102 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 16955 gcttatcaaatgatttttaagataaaaaggtagaccaaaataataataccaaacaaaccc 16896 Query: 103 aatcgggactaaataagatcccagtaagactcaccgaaccaacatgtcctcacttgacat 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16895 aatcgggactaaataagatcccagtaagactcaccgaaccaacatgtcctcacttgacat 16836 Query: 163 caatgagcaacgtgctcttataaagtctgctcacagatacatctcagagaaactcgagga 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16835 caatgagcaacgtgctcttataaagtctgctcacagatacatctcagagaaactcgagga 16776 Query: 223 tcacttctcatccgagtttttaccaaaggctcttgtgatttgtggatctggtttaagtgg 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16775 tcacttctcatccgagtttttaccaaaggctcttgtgatttgtggatctggtttaagtgg 16716 Query: 283 aatctcaaccaagatcgctgatgaaccaaagccattgattctgtcttattcgaccattcc 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16715 aatctcaaccaagatcgctgatgaaccaaagccattgattctgtcttattcgaccattcc 16656 Query: 343 tggcttcaaagtcagcaccgtacctggacatagtggtgagttgatctttggctacatgaa 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16655 tggcttcaaagtcagcaccgtacctggacatagtggtgagttgatctttggctacatgaa 16596 Query: 403 cggtgcgcctgtcgtcttaatgaatggccgtttgcattcttatgagggccattccttagc 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16595 cggtgcgcctgtcgtcttaatgaatggccgtttgcattcttatgagggccattccttagc 16536 Query: 463 agaaacagtgcatcctatccgtgcattgcacttgttggggtcaatcaatgtcttgatcgt 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16535 agaaacagtgcatcctatccgtgcattgcacttgttggggtcaatcaatgtcttgatcgt 16476 Query: 523 aacaaatgcagccggtggtatcaatgcctcctttaaggctggggatttaatgtgtgtcta 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16475 aacaaatgcagccggtggtatcaatgcctcctttaaggctggggatttaatgtgtgtcta 16416 Query: 583 cgaccatatcaatttcccaggattatgcgggttccatcctctaaggggagctaattttga 642 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16415 cgaccatatcaatttcccaggattatgcgggttccatcctctaaggggagctaattttga 16356 Query: 643 cgaatttgggccaagattcttggctaccagtgatgcttatgacttggaactacgtaagct 702 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16355 cgaatttgggccaagattcttggctaccagtgatgcttatgacttggaactacgtaagct 16296 Query: 703 attgttttcaaagaaaaaagagctcaatatcgaaagaaagatccatgagggtacctactc 762 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16295 attgttttcaaagaaaaaagagctcaatatcgaaagaaagatccatgagggtacctactc 16236 Query: 763 atacgttcatggtcctaccttcgaaagcagagctgaatcacgtttcttgagattggctgg 822 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16235 atacgttcatggtcctaccttcgaaagcagagctgaatcacgtttcttgagattggctgg 16176 Query: 823 tacagatgctgtgggaatgagtactgttcctgagggtg-tactgctanaca-tgtggctg 880 ||||||||||||||||||||||||||||||||||| || |||||||| ||| |||||||| Sbjct: 16175 tacagatgctgtgggaatgagtactgttcctgaggttgttactgctagacattgtggctg 16116 Query: 881 tagagt-cttg-cttatcctt-attacaaatg-atgtgtcgttgatcctccacccag 933 ||||| |||| ||||||||| || ||||||| ||||||||||||||||||| |||| Sbjct: 16115 gagagtacttgccttatccttaatcacaaatgaatgtgtcgttgatcctccagccag 16059 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5662 Number of Sequences: 1807 Number of extensions: 5662 Number of successful extensions: 34 Number of sequences better than 1.0e-20: 1 length of query: 939 length of database: 10,358,551 effective HSP length: 16 effective length of query: 923 effective length of database: 10,329,639 effective search space: 9534256797 effective search space used: 9534256797 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)