BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC17ZD04FM1.SCF screened BAC_end (908 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1804 1574 0.0 >3x_Contig1804 Length = 51183 Score = 1574 bits (794), Expect = 0.0 Identities = 817/823 (99%), Gaps = 2/823 (0%) Strand = Plus / Minus Query: 86 aatgcatggatttcaaatcctaaatttatataacaatttaatacatcttggacaccatta 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14725 aatgcatggatttcaaatcctaaatttatataacaatttaatacatcttggacaccatta 14666 Query: 146 catattttaggcaaggtgataagagcatgtcatttcaaaatcattcaattaaaagtttgg 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14665 catattttaggcaaggtgataagagcatgtcatttcaaaatcattcaattaaaagtttgg 14606 Query: 206 gtaaaagtaacatacgtagtgacggggtttatctaaaatctatatgtgcatgcgtttgtg 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14605 gtaaaagtaacatacgtagtgacggggtttatctaaaatctatatgtgcatgcgtttgtg 14546 Query: 266 cttgtattacattagaaacggaattaaagttcatttttaaatttatgcttttctaagata 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14545 cttgtattacattagaaacggaattaaagttcatttttaaatttatgcttttctaagata 14486 Query: 326 agaacactcactttagaaaacatcaccttggtgcaacatagcatcagcaactctgatgaa 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14485 agaacactcactttagaaaacatcaccttggtgcaacatagcatcagcaactctgatgaa 14426 Query: 386 accagtcaagttagcacccttaaccaaagatggcaaagcttcaacgttagattcgttaga 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14425 accagtcaagttagcacccttaaccaaagatggcaaagcttcaacgttagattcgttaga 14366 Query: 446 atattcctttgcagtagtaacacagtcatcgaaacaagtagtcatgatcttcttcaattc 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14365 atattcctttgcagtagtaacacagtcatcgaaacaagtagtcatgatcttcttcaattc 14306 Query: 506 agcgtcaactgtttctctggtccatgaaactctagcggagttttgagccatttccaaacc 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14305 agcgtcaactgtttctctggtccatgaaactctagcggagttttgagccatttccaaacc 14246 Query: 566 agaaacagcaacaccacccatgttagaagccttacctggagcgtaccagacggcaggagc 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14245 agaaacagcaacaccacccatgttagaagccttacctggagcgtaccagacggcaggagc 14186 Query: 626 actagcggaggcagtttgcaaacgaacaccttcgaagacatcgatggcttcttgagtgga 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14185 actagcggaggcagtttgcaaacgaacaccttcgaagacatcgatggcttcttgagtgga 14126 Query: 686 acccatattagaaccttcagcaacgaacttgacaccattggcaaccaagtgttcagcttc 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14125 acccatattagaaccttcagcaacgaacttgacaccattggcaaccaagtgttcagcttc 14066 Query: 746 agcaccagaaacttcgttttgagtggcacatggcanagcaacatcaaccttacctacgtg 805 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 14065 agcaccagaaacttcgttttgagtggcacatggcaaagcaacatcaaccttacctacgtg 14006 Query: 806 aacccatggtctagcaccagcgatgtatttcacagaacttncanagaagacagaagcttc 865 |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 14005 aacccatggtctagcaccagcgatgtatttcacagaacttccagagaagacagaagcttc 13946 Query: 866 acc-acgatttgtt-caaagtcttccaggctgctttaccatct 906 ||| |||||||||| ||||||||||||||||||| |||||||| Sbjct: 13945 accaacgatttgttccaaagtcttccaggctgctctaccatct 13903 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6208 Number of Sequences: 1807 Number of extensions: 6208 Number of successful extensions: 40 Number of sequences better than 1.0e-20: 1 length of query: 908 length of database: 10,358,551 effective HSP length: 16 effective length of query: 892 effective length of database: 10,329,639 effective search space: 9214037988 effective search space used: 9214037988 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)