BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC17ZD08FM1.SCF screened BAC_end (963 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1591 1584 0.0 >3x_Contig1591 Length = 14045 Score = 1584 bits (799), Expect = 0.0 Identities = 838/848 (98%), Gaps = 3/848 (0%) Strand = Plus / Minus Query: 86 tcttggcaggcaatcctgatactttctatcacaatttgaagaacgtattaaatataagag 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6198 tcttggcaggcaatcctgatactttctatcacaatttgaagaacgtattaaatataagag 6139 Query: 146 taataccgatattacactattgcttcatcgtttctctagaacagcgaccagcgatgaaat 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6138 taataccgatattacactattgcttcatcgtttctctagaacagcgaccagcgatgaaat 6079 Query: 206 atcgatgaaagactctgttacagaactactggctaacggtaaaagataacaatgtgatta 265 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6078 atcgatgaaagacgccgttacagaactactggctaacggtaaaagataacaatgtgatta 6019 Query: 266 cttcttcatccttcctttaaataaaaccaaacatcaagagcagacatcaaatttacgtac 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6018 cttcttcatccttcctttaaataaaaccaaacatcaagagcagacatcaaatttacgtac 5959 Query: 326 caatccttttttttttcatcaccataaagggaaatgacttgatatggcacttcactgagt 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5958 caatccttttttttttcatcaccataaagggaaatgacttgatatggcacttcactgagt 5899 Query: 386 aaagaacatccacacaaagtggcccgaatggggtatcgaaatcaggcactaatgcgccga 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5898 aaagaacatccacacaaagtggcccgaatggggtatcgaaatcaggcactaatgcgccga 5839 Query: 446 caaaacagaatagctattcttcttatcgtgcagataaacagagaaattccactgatcatg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5838 caaaacagaatagctattcttcttatcgtgcagataaacagagaaattccactgatcatg 5779 Query: 506 cagatcgtcgaggtataaaaaagtctaaaatggttcggaatacaattctcacattcacgc 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5778 cagatcgtcgaggtataaaaaagtctaaaatggttcggaatacaattctcacattcacgc 5719 Query: 566 aaaatatttccatattaggtatcattttgctttgtgatgaaatctaaaaacttaaaactt 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5718 aaaatatttccatattaggtatcattttgctttgtgatgaaatctaaaaacttaaaactt 5659 Query: 626 gaggtcgctgttgatagcagatcctggctttaatacacatcatgaactgttactccaaac 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5658 gaggtcgctgttgatagcagatcctggctttaatacacatcatgaactgttactccaaac 5599 Query: 686 tagatagcaagcaggtgcttaacgttaatctctccactttatctctctttaggaatgcat 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5598 tagatagcaagcaggtgcttaacgttaatctctccactttatctctctttaggaatgcat 5539 Query: 746 gggagataaaggattgaaggaaaacgatatttcatataaaataggcaagctaatcacttg 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5538 gggagataaaggattgaaggaaaacgatatttcatataaaataggcaagctaatcacttg 5479 Query: 806 gtcgatgagcttcatgcatgtttccttcatctcgagctgctaataaatgtataatantat 865 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 5478 gtcgatgagcttcatgcatgtttccttcatctcgagctgctaataaatgtataatataat 5419 Query: 866 accggnaaacattttacactaac-atccatattcagctcnacctttacttgtcaagactt 924 ||||| ||||| || |||||||| ||||||||||||||| ||| |||||||||||||||| Sbjct: 5418 accggaaaaca-ttaacactaacaatccatattcagctcaacc-ttacttgtcaagactt 5361 Query: 925 gataacat 932 |||||||| Sbjct: 5360 gataacat 5353 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7839 Number of Sequences: 1807 Number of extensions: 7839 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 963 length of database: 10,358,551 effective HSP length: 16 effective length of query: 947 effective length of database: 10,329,639 effective search space: 9782168133 effective search space used: 9782168133 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)