BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC17ZD09RM1.SCF screened BAC_end
         (942 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1449                                                        1647   0.0  

>3x_Contig1449 
          Length = 7865

 Score = 1647 bits (831), Expect = 0.0
 Identities = 882/897 (98%), Gaps = 2/897 (0%)
 Strand = Plus / Plus

                                                                        
Query: 45   ctttggcgtagagcttgcacttttagacggtttagcaagtgtaggtggtgcatgtgagtg 104
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 6740 ctttggcgtagagcttgcacttgtagacggtttagcaagtgtaggtggtgcatgtgagtg 6799

                                                                        
Query: 105  atgggcatgttccttcctggcattgttgaaagcatccgcttcttcccctggttcatgtaa 164
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6800 atgggcatgttccttcctggcattgttgaaagcatccgcttcttcccctggttcatgtaa 6859

                                                                        
Query: 165  aaacatacagttcggatttggacatggttgtcccctcaaatacgaggagcagtactttgt 224
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6860 aaacatacagttcggatttggacatggttgtcccctcaaatacgaggagcagtactttgt 6919

                                                                        
Query: 225  tgtaccatatgctgctttcacttgatgtccatcaatatagataccatctatggcttgaat 284
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6920 tgtaccatatgctgctttcacttgatgtccatcaatatagataccatctatggcttgaat 6979

                                                                        
Query: 285  acattttgctgcatcgtcttttctggaaaaagtaacgtaaataccgtaacctgaatttat 344
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6980 acattttgctgcatcgtcttttctggaaaaagtaacgtaaataccgtaacctgaatttat 7039

                                                                        
Query: 345  atgactcgatgaatttgaaacagaatggtgctcgtgtccagtcttcttattgatgacgat 404
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7040 atgactcgatgaatttgaaacagaatggtgctcgtgtccagtcttcttattgatgacgat 7099

                                                                        
Query: 405  cttgttaatttttccatactggccaaaatacttgtccgatctcaagatggatggaagttc 464
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7100 cttgttaattttttcatactggccaaaatacttgtccgatctcaagatggatggaagttc 7159

                                                                        
Query: 465  ttcgtaagggtaaggtggattcaacccaataacgtaaaccaaattcttctgaatgaccct 524
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7160 ttcgtaagggtaaggtggattcaacccaataacgtaaaccaaattcttctgaatgaccct 7219

                                                                        
Query: 525  cataccagcaagctgtttcctattatgagtgtcattttctctacgttcacgctccctttg 584
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7220 cataccagcaagctgtttcctattatgagtgtcattttctctacgttcacgctccctttg 7279

                                                                        
Query: 585  cttacgatcacgttcttttctggcctgcttggaacgttccattttcaactcttctggaga 644
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7280 cttacgatcacgttcttttctggcctgcttggaacgttccattttcaactcttctggaga 7339

                                                                        
Query: 645  aagaacgatgtactcgacgctttcatcgtcgtactttcgacgacaagccggacatcgacc 704
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7340 aagaacgatgtactcgacgctttcatcgtcgtactttcgacgacaagccggacatcgacc 7399

                                                                        
Query: 705  attaagctcangattttgacgaatattgttataacaaaactgacanatctgatattcaca 764
            |||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 7400 attaagctcaggattttgacgaatattgttataacaaaactgacaaatctgatatccaca 7459

                                                                        
Query: 765  aggacaaggcttgaaatgcttatccataacatcgagtggttctatacaaagtggacacaa 824
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7460 aggacaaggcttgaaatgcttatccataacatcgagtggttctatacaaagtggacacaa 7519

                                                                        
Query: 825  gtcctcttcgtcattcgattagaaggacgtatcgtaatttgattaagctttctgaatctc 884
            |||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 7520 gtcctcttcgtcatccgataagaaggacgtatcgtaatttgataaagctttctgaatctc 7579

                                                                     
Query: 885  atgctgattcttgagaacatggcggatttt-cgtagccctggcattcattttatccg 940
            |||||||||||   |||||| ||||||||| ||||||| |||||||||| |||||||
Sbjct: 7580 atgctgattctgatgaacat-gcggattttccgtagccgtggcattcatcttatccg 7635


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5882
Number of Sequences: 1807
Number of extensions: 5882
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 942
length of database: 10,358,551
effective HSP length: 16
effective length of query: 926
effective length of database: 10,329,639
effective search space: 9565245714
effective search space used: 9565245714
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)