BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC17ZD09RM1.SCF screened BAC_end (942 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1449 1647 0.0 >3x_Contig1449 Length = 7865 Score = 1647 bits (831), Expect = 0.0 Identities = 882/897 (98%), Gaps = 2/897 (0%) Strand = Plus / Plus Query: 45 ctttggcgtagagcttgcacttttagacggtttagcaagtgtaggtggtgcatgtgagtg 104 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 6740 ctttggcgtagagcttgcacttgtagacggtttagcaagtgtaggtggtgcatgtgagtg 6799 Query: 105 atgggcatgttccttcctggcattgttgaaagcatccgcttcttcccctggttcatgtaa 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6800 atgggcatgttccttcctggcattgttgaaagcatccgcttcttcccctggttcatgtaa 6859 Query: 165 aaacatacagttcggatttggacatggttgtcccctcaaatacgaggagcagtactttgt 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6860 aaacatacagttcggatttggacatggttgtcccctcaaatacgaggagcagtactttgt 6919 Query: 225 tgtaccatatgctgctttcacttgatgtccatcaatatagataccatctatggcttgaat 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6920 tgtaccatatgctgctttcacttgatgtccatcaatatagataccatctatggcttgaat 6979 Query: 285 acattttgctgcatcgtcttttctggaaaaagtaacgtaaataccgtaacctgaatttat 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6980 acattttgctgcatcgtcttttctggaaaaagtaacgtaaataccgtaacctgaatttat 7039 Query: 345 atgactcgatgaatttgaaacagaatggtgctcgtgtccagtcttcttattgatgacgat 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7040 atgactcgatgaatttgaaacagaatggtgctcgtgtccagtcttcttattgatgacgat 7099 Query: 405 cttgttaatttttccatactggccaaaatacttgtccgatctcaagatggatggaagttc 464 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7100 cttgttaattttttcatactggccaaaatacttgtccgatctcaagatggatggaagttc 7159 Query: 465 ttcgtaagggtaaggtggattcaacccaataacgtaaaccaaattcttctgaatgaccct 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7160 ttcgtaagggtaaggtggattcaacccaataacgtaaaccaaattcttctgaatgaccct 7219 Query: 525 cataccagcaagctgtttcctattatgagtgtcattttctctacgttcacgctccctttg 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7220 cataccagcaagctgtttcctattatgagtgtcattttctctacgttcacgctccctttg 7279 Query: 585 cttacgatcacgttcttttctggcctgcttggaacgttccattttcaactcttctggaga 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7280 cttacgatcacgttcttttctggcctgcttggaacgttccattttcaactcttctggaga 7339 Query: 645 aagaacgatgtactcgacgctttcatcgtcgtactttcgacgacaagccggacatcgacc 704 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7340 aagaacgatgtactcgacgctttcatcgtcgtactttcgacgacaagccggacatcgacc 7399 Query: 705 attaagctcangattttgacgaatattgttataacaaaactgacanatctgatattcaca 764 |||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 7400 attaagctcaggattttgacgaatattgttataacaaaactgacaaatctgatatccaca 7459 Query: 765 aggacaaggcttgaaatgcttatccataacatcgagtggttctatacaaagtggacacaa 824 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7460 aggacaaggcttgaaatgcttatccataacatcgagtggttctatacaaagtggacacaa 7519 Query: 825 gtcctcttcgtcattcgattagaaggacgtatcgtaatttgattaagctttctgaatctc 884 |||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 7520 gtcctcttcgtcatccgataagaaggacgtatcgtaatttgataaagctttctgaatctc 7579 Query: 885 atgctgattcttgagaacatggcggatttt-cgtagccctggcattcattttatccg 940 ||||||||||| |||||| ||||||||| ||||||| |||||||||| ||||||| Sbjct: 7580 atgctgattctgatgaacat-gcggattttccgtagccgtggcattcatcttatccg 7635 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5882 Number of Sequences: 1807 Number of extensions: 5882 Number of successful extensions: 37 Number of sequences better than 1.0e-20: 1 length of query: 942 length of database: 10,358,551 effective HSP length: 16 effective length of query: 926 effective length of database: 10,329,639 effective search space: 9565245714 effective search space used: 9565245714 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)